RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SLC4A1P02730 911 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 RSPH10BP0C881 870 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 NTSP30990 170 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 STARP49675 285 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 TFDP1Q14186 410 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 AANATQ16613 207 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 LRRC36Q1X8D7 754 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 ZNF630Q2M218 657 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 CCDC40Q4G0X9 1142 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 AGBL2Q5U5Z8 902 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 OR8G2PQ6IF36 304 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 IRGCQ6NXR0 463 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 SCYL2Q6P3W7 929 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 STAC2Q6ZMT1 411 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 TMEM26Q6ZUK4 368 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 VPS36Q86VN1 386 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 SERPINA9Q86WD7 417 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 OR2A12Q8NGT7 310 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 OR9A4Q8NGU2 314 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 TAF4BQ92750 862 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 SLC25A39Q9BZJ4 359 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 TMEM231Q9H6L2 316 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 TRPV5Q9NQA5 729 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 LCMT1Q9UIC8 334 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 CDC42BPBQ9Y5S2 1711 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 IGHV7-81A0A0B4J1V7 117 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 TRIM3O75382 744 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 SUPT7LO94864 414 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 ANXA4P09525 319 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 NOVA1P51513 510 aaKnown RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 MRPS11P82912 194 aaKnown RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 LRRC63Q05C16 580 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 C1orf186Q6ZWK4 172 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 MIER3Q7Z3K6 550 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 HSD11B1LQ7Z5J1 315 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 IL22RA2Q969J5 263 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 NSMCE2Q96MF7 247 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 RUFY1Q96T51 708 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 RPAP3Q9H6T3 665 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 P2RX2Q9UBL9 471 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 FETUBQ9UGM5 382 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 NAP1L2Q9ULW6 460 aaPredicted RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 SAMD4AQ9UPU9 718 aaKnown RBP2.6□□□□□ -1.99
PMS1-203ENST00000409593 SMC3Q9UQE7 1217 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 MAB21L2Q9Y586 359 aa2.6□□□□□ -1.99
PMS1-203ENST00000409593 CFAP73A6NFT4 308 aa2.59□□□□□ -2
PMS1-203ENST00000409593 E9PMD0 336 aa2.59□□□□□ -2
PMS1-203ENST00000409593 SGK494L7N484 410 aa2.59□□□□□ -2
PMS1-203ENST00000409593 DFNA5O60443 496 aa2.59□□□□□ -2
PMS1-203ENST00000409593 VDRP11473 427 aa2.59□□□□□ -2
PMS1-203ENST00000409593 IGLL1P15814 213 aa2.59□□□□□ -2
PMS1-203ENST00000409593 HLA-DPA1P20036 260 aa2.59□□□□□ -2
PMS1-203ENST00000409593 HOXD10P28358 340 aa2.59□□□□□ -2
PMS1-203ENST00000409593 CD1BP29016 333 aa2.59□□□□□ -2
PMS1-203ENST00000409593 SFNP31947 248 aa2.59□□□□□ -2
PMS1-203ENST00000409593 UGT1A5P35504 534 aa2.59□□□□□ -2
PMS1-203ENST00000409593 MPPED2Q15777 294 aa2.59□□□□□ -2
PMS1-203ENST00000409593 CCDC184Q52MB2 194 aa2.59□□□□□ -2
PMS1-203ENST00000409593 OR6B2Q6IFH4 312 aa2.59□□□□□ -2
PMS1-203ENST00000409593 CCDC71LQ8N9Z2 235 aa2.59□□□□□ -2
PMS1-203ENST00000409593 ZSCAN4Q8NAM6 433 aaPredicted RBP2.59□□□□□ -2
PMS1-203ENST00000409593 MSANTD4Q8NCY6 345 aa2.59□□□□□ -2
PMS1-203ENST00000409593 OR9A1PQ8NGU1 263 aa2.59□□□□□ -2
PMS1-203ENST00000409593 TMEM101Q96IK0 257 aa2.59□□□□□ -2
PMS1-203ENST00000409593 TMEM121Q9BTD3 319 aa2.59□□□□□ -2
PMS1-203ENST00000409593 XPO4Q9C0E2 1151 aaKnown RBP2.59□□□□□ -2
PMS1-203ENST00000409593 NARFLQ9H6Q4 476 aa2.59□□□□□ -2
PMS1-203ENST00000409593 COG4Q9H9E3 785 aa2.59□□□□□ -2
PMS1-203ENST00000409593 NANSQ9NR45 359 aa2.59□□□□□ -2
PMS1-203ENST00000409593 UTP6Q9NYH9 597 aaKnown RBP2.59□□□□□ -2
PMS1-203ENST00000409593 ANKMY1Q9P2S6 941 aa2.59□□□□□ -2
PMS1-203ENST00000409593 EIF3LQ9Y262 564 aaKnown RBP2.59□□□□□ -2
PMS1-203ENST00000409593 IFT52Q9Y366 437 aa2.59□□□□□ -2
PMS1-203ENST00000409593 GMPPBQ9Y5P6 360 aa2.59□□□□□ -2
PMS1-203ENST00000409593 A0A0J9YXY3 114 aa2.58□□□□□ -2
PMS1-203ENST00000409593 SLC9B1P1A6NJY1 282 aa2.58□□□□□ -2
PMS1-203ENST00000409593 USP27XA6NNY8 438 aa2.58□□□□□ -2
PMS1-203ENST00000409593 LGALS8O00214 317 aa2.58□□□□□ -2
PMS1-203ENST00000409593 ZNF264O43296 627 aa2.58□□□□□ -2
PMS1-203ENST00000409593 BBOX1O75936 387 aa2.58□□□□□ -2
PMS1-203ENST00000409593 BCKDHAP12694 445 aa2.58□□□□□ -2
PMS1-203ENST00000409593 H2AFXP16104 143 aaPredicted RBP2.58□□□□□ -2
PMS1-203ENST00000409593 TFDP3Q5H9I0 405 aa2.58□□□□□ -2
PMS1-203ENST00000409593 LPCAT2Q7L5N7 544 aa2.58□□□□□ -2
PMS1-203ENST00000409593 LRRC70Q7Z2Q7 622 aa2.58□□□□□ -2
PMS1-203ENST00000409593 SKA3Q8IX90 412 aa2.58□□□□□ -2
PMS1-203ENST00000409593 FBXO30Q8TB52 745 aa2.58□□□□□ -2
PMS1-203ENST00000409593 UPRTQ96BW1 309 aa2.58□□□□□ -2
PMS1-203ENST00000409593 SDSLQ96GA7 329 aa2.58□□□□□ -2
PMS1-203ENST00000409593 ATP6V0BQ99437 205 aa2.58□□□□□ -2
PMS1-203ENST00000409593 TXN2Q99757 166 aa2.58□□□□□ -2
PMS1-203ENST00000409593 COMMD4Q9H0A8 199 aa2.58□□□□□ -2
PMS1-203ENST00000409593 THAP9Q9H5L6 903 aa2.58□□□□□ -2
PMS1-203ENST00000409593 GPN2Q9H9Y4 310 aaPredicted RBP2.58□□□□□ -2
PMS1-203ENST00000409593 UBQLN1Q9UMX0 589 aaKnown RBP2.58□□□□□ -2
PMS1-203ENST00000409593 NUDCQ9Y266 331 aa2.58□□□□□ -2
PMS1-203ENST00000409593 IGLV3-16A0A075B6K0 115 aa2.57□□□□□ -2
PMS1-203ENST00000409593 IGHV1OR15-1A0A075B7D0 117 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms