RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 OR52P1PQ8NH57 321 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 C9orf43Q8TAL5 461 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 PHOSPHO1Q8TCT1 267 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 PAQR8Q8TEZ7 354 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 FAM162AQ96A26 154 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 SH3YL1Q96HL8 342 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 SPATA9Q9BWV2 254 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 SH2D2AQ9NP31 389 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 UBQLN4Q9NRR5 601 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 CALML5Q9NZT1 146 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 NCKAP5O14513 1909 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 DSPPQ9NZW4 1301 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
CHRNA1-204ENST00000409323 A0A0G2JPF8 293 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 AGAP5A6NIR3 686 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 HNRNPCL2B2RXH8 293 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 B4DXG7 233 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 HNRNPCL3B7ZW38 293 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SCDO00767 359 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 GNB5O14775 395 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ARPC2O15144 300 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 FRS3O43559 492 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 FADS1O60427 444 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SOX30O94993 753 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 HNRNPCL4P0DMR1 293 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 IL7RP16871 459 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 NAGAP17050 411 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 TNFRSF1BP20333 461 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ATP6V1B2P21281 511 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 TBXA2RP21731 343 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 HTR1EP28566 365 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 PCBP3P57721 371 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 PMP22Q01453 160 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 PLAURQ03405 335 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 GNA13Q14344 377 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ZNF766Q5HY98 468 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ZNF836Q6ZNA1 936 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SPPL2CQ8IUH8 684 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 PEX5LQ8IYB4 626 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 CLIP4Q8N3C7 705 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 DOHHQ9BU89 302 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 OSBPL11Q9BXB4 747 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 MTHFD2LQ9H903 347 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 TIMMDC1Q9NPL8 285 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SEC14L3Q9UDX4 400 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 SLC7A8Q9UHI5 535 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ZNF443Q9Y2A4 671 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 AP3M1Q9Y2T2 418 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ZNF451Q9Y4E5 1061 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 BOD1L1Q8NFC6 3051 aa12.9□□□□□ -0.34
CHRNA1-204ENST00000409323 ADAM10O14672 748 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF682O95780 498 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 ANGPTL1O95841 491 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SERPINA1P01009 418 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SP1P08047 785 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 FREM3P0C091 2139 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 PABPC4LP0CB38 370 aaKnown RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 UBTFL6P0CB48 400 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 KDELR2P33947 212 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 DUSP7Q16829 419 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 KLHL26Q53HC5 615 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF311Q5JNZ3 666 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC25A25Q6KCM7 469 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 PTRH1Q86Y79 214 aaKnown RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 ARMC8Q8IUR7 673 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SULF2Q8IWU5 870 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 FAM86B1Q8N7N1 296 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 GOLM1Q8NBJ4 401 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC26A7Q8TE54 656 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 DUSP19Q8WTR2 217 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 WDR60Q8WVS4 1066 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 TPD52L3Q96J77 140 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 SGCZQ96LD1 299 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 C5orf34Q96MH7 638 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 WFDC6Q9BQY6 131 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 RNF32Q9H0A6 362 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 TRIM45Q9H8W5 580 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 BCL2L10Q9HD36 194 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 CHST2Q9Y4C5 530 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 DTNAQ9Y4J8 743 aa12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 GPC6Q9Y625 555 aaPredicted RBP12.9□□□□□ -0.35
CHRNA1-204ENST00000409323 H0YHG0 523 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 NDUFB5O43674 189 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 MFN2O95140 757 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 EPPINO95925 133 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 GKN3PP0CG01 181 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 CD46P15529 392 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 MASP1P48740 699 aa12.89□□□□□ -0.35
CHRNA1-204ENST00000409323 CCR4P51679 360 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms