RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 DOK4Q8TEW6 326 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 DIRAS2Q96HU8 199 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 DEPDC7Q96QD5 511 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 OR2A5Q96R48 311 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 RPP25Q9BUL9 199 aaKnown RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 EVA1BQ9NVM1 165 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 PILRAQ9UKJ1 303 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CD8B2A6NJW9 211 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 FOXS1O43638 330 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CD8BP10966 210 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 COL9A1P20849 921 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 BTN3A2P78410 334 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 ST3GAL3Q11203 375 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 LRRC32Q14392 662 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TRMT12Q53H54 448 aaKnown RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 YIF1BQ5BJH7 314 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 PAMR1Q6UXH9 720 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 UBE2Q1Q7Z7E8 422 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 ZAR1Q86SH2 424 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 GALNT12Q8IXK2 581 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 HSD17B8Q92506 261 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 PTP4A1Q93096 173 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 SAMD8Q96LT4 415 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 ZNF350Q9GZX5 532 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 SLC22A4Q9H015 551 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 UBQLN3Q9H347 655 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 OBP2AQ9NY56 170 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 A0A0G2JMP0 313 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 POM121BA6NF01 834 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 OR5F1O95221 314 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 APOA1P02647 267 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 NGFRP08138 427 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MYL12AP19105 171 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 C5AR1P21730 350 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 ADPRHP54922 357 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 ABATP80404 500 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 PRR5P85299 388 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 TGM3Q08188 693 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 ARMC4Q5T2S8 1044 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 DDI2Q5TDH0 399 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 NRROSQ86YC3 692 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 OR4N5Q8IXE1 308 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 CAMKK1Q8N5S9 505 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 BRIX1Q8TDN6 353 aaKnown RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 SDF2Q99470 211 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 TMEM43Q9BTV4 400 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 BEX2Q9BXY8 128 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 TRIM45Q9H8W5 580 aaPredicted RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 RNF121Q9H920 327 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MED17Q9NVC6 651 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MPDZO75970 2070 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 PEX12O00623 359 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 SLC30A4O14863 429 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 NR2F6P10588 404 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 ALAS2P22557 587 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MLLT3P42568 568 aaPredicted RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 SCN1BQ07699 218 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 EFR3AQ14156 821 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 FAM27D1Q5T7N8 215 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 SMAP2Q8WU79 429 aaPredicted RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 MS4A4EQ96PG1 132 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MCHR1Q99705 422 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 APOOQ9BUR5 198 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 RAB11FIP5Q9BXF6 653 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MEPEQ9NQ76 525 aaPredicted RBP9.15□□□□□ -0.94
MSH2-202ENST00000406134 COMMD3Q9UBI1 195 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 MALT1Q9UDY8 824 aa9.15□□□□□ -0.94
MSH2-202ENST00000406134 CACNA1IQ9P0X4 2223 aa9.15□□□□□ -0.95
MSH2-202ENST00000406134 A0A1W2PQF6 199 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 A0A1W2PQU0 124 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 C10orf142B7Z368 130 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 H0Y8X5 98 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 AK4P27144 223 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 MPIP34949 423 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 LSSP48449 732 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 DGAT2L6Q6ZPD8 337 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 KLBQ86Z14 1044 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 LIX1LQ8IVB5 337 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CPOQ8IVL8 374 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 TMEFF1Q8IYR6 380 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PIGXQ8TBF5 258 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 HOXB13Q92826 284 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 OSTF1Q92882 214 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 GAL3ST3Q96A11 431 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 UBL7Q96S82 380 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 GAS2L1Q99501 681 aaPredicted RBP9.14□□□□□ -0.95
MSH2-202ENST00000406134 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 FBXL4Q9UKA2 621 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CA5BQ9Y2D0 317 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 FAM172BPA6NC97 362 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 RNF13O43567 381 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 CT62P0C5K7 136 aa9.14□□□□□ -0.95
MSH2-202ENST00000406134 GKN3PP0CG01 181 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms