RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MEN1O00255 615 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 CPNE3O75131 537 aaKnown RBP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 LINGO3P0C6S8 592 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 ZNF806P0C7X5 589 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 MMP11P24347 488 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 GSSP48637 474 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 HLCSP50747 726 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 ATP12AP54707 1039 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 NUP107P57740 925 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 TARDBPQ13148 414 aaKnown RBP eCLIP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 FGFBP1Q14512 234 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 MAD2L1BPQ15013 274 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 EBPQ15125 230 aaKnown RBP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 FOXB2Q5VYV0 432 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 NKAIN4Q8IVV8 208 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 UBE2FQ969M7 185 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 PMEPA1Q969W9 287 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 LCORQ96JN0 433 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 MESP1Q9BRJ9 268 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 ADNPQ9H2P0 1102 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 ARMC7Q9H6L4 198 aa23.66■■□□□ 1.38
CPNE1-205ENST00000401607 TUBA8Q9NY65 449 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-205ENST00000401607 A0A087WXM4 84 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 HEXBP07686 556 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 CHMP24386 653 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 IFNA8P32881 189 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 ESRRGP62508 458 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 C1orf94Q6P1W5 598 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 ANKRD37Q7Z713 158 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 GRAMD2AQ8IUY3 354 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 EFHD2Q96C19 240 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 SPSB2Q99619 263 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 AKIRIN1Q9H9L7 192 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 FBXO8Q9NRD0 319 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 DNAJB12Q9NXW2 375 aaKnown RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 TESQ9UGI8 421 aaKnown RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 IGHV3-20A0A0C4DH32 117 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 FMO6PO60774 539 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 OSMP13725 252 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 CCKBRP32239 447 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 CRISP1P54107 249 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 PSMD4P55036 377 aaKnown RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 DECR1Q16698 335 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 SATL1Q86VE3 508 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 NAXDQ8IW45 347 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 ENTHD1Q8IYW4 607 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 AMER2Q8N7J2 671 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 OR4C3Q8NH37 302 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 GAL3ST4Q96RP7 486 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 GPA33Q99795 319 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 POLR2J2Q9GZM3 115 aaKnown RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 POLR2J3Q9H1A7 115 aaKnown RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 SLC26A1Q9H2B4 701 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 EVA1AQ9H8M9 152 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-205ENST00000401607 TTC28Q96AY4 2481 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 A0A0C4DFX4 3053 aa23.65■■□□□ 1.38
CPNE1-205ENST00000401607 RALGAPA1Q6GYQ0 2036 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 C2orf92A0A1B0GVN3 265 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 SLC1A7O00341 560 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 ALOX12BO75342 701 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 TP53P04637 393 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-205ENST00000401607 GPR143P51810 404 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 NR1H2P55055 460 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 PTGES3Q15185 160 aaKnown RBP23.64■■□□□ 1.37
CPNE1-205ENST00000401607 APLFQ8IW19 511 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-205ENST00000401607 COPS7AQ9UBW8 275 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 SLC7A7Q9UM01 511 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 RNF6Q9Y252 685 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 GPR179Q6PRD1 2367 aa23.64■■□□□ 1.37
CPNE1-205ENST00000401607 ZAR1LA6NP61 321 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 CBFA2T3O75081 653 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 LYPD3O95274 346 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 IL33O95760 270 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 TOP3AQ13472 1001 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-205ENST00000401607 OR1Q1Q15612 314 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 NADK2Q4G0N4 442 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 MRPL14Q6P1L8 145 aaKnown RBP23.63■■□□□ 1.37
CPNE1-205ENST00000401607 CD300LDQ6UXZ3 194 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 RBM44Q6ZP01 1051 aaKnown RBP23.63■■□□□ 1.37
CPNE1-205ENST00000401607 SUMF1Q8NBK3 374 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 FAM81AQ8TBF8 368 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 APH1BQ8WW43 257 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ACOT11Q8WXI4 607 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF566Q969W8 418 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ARSGQ96EG1 525 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 PRSS27Q9BQR3 290 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 FLRT3Q9NZU0 649 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 TRAPPC13A5PLN9 417 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ADAM11O75078 769 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ANGPTL1O95841 491 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 IGFBP1P08833 259 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-205ENST00000401607 DCAF7P61962 342 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ILKQ13418 452 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 ZNF730Q6ZMV8 503 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 PRICKLE2Q7Z3G6 844 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 SGCDQ92629 289 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 EDEM2Q9BV94 578 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 NRSN2Q9GZP1 204 aa23.63■■□□□ 1.37
CPNE1-205ENST00000401607 WWTR1Q9GZV5 400 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms