RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 STX11O75558 287 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MBL2P11226 248 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 FGF5P12034 268 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 EDN2P20800 178 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 EEFSECP57772 596 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MYBPC1Q00872 1141 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MC2RQ01718 297 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DSC1Q08554 894 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 RUNDC3AQ59EK9 446 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 C6orf10Q5SRN2 563 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CCNYL2Q5T2Q4 361 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ATG9BQ674R7 924 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ADNP2Q6IQ32 1131 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC39A5Q6ZMH5 540 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ABHD12BQ7Z5M8 362 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 LHFPL4Q7Z7J7 247 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TSPAN33Q86UF1 283 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ANKRD46Q86W74 232 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 FAM126BQ8IXS8 530 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 HS3ST5Q8IZT8 346 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 APCDD1Q8J025 514 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 UMODL1-AS1Q8N2C9 162 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 LILRA3Q8N6C8 439 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 RP9Q8TA86 221 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DTD1Q8TEA8 209 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CYGBQ8WWM9 190 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TOX2Q96NM4 488 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MUS81Q96NY9 551 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DUX5Q96PT3 197 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 VN1R3Q9BXE9 311 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TRIM45Q9H8W5 580 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SEC14L3Q9UDX4 400 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 RIMS3Q9UJD0 308 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TINAGQ9UJW2 476 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF225Q9UK10 706 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SPATA2Q9UM82 520 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PSMD13Q9UNM6 376 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 RASD1Q9Y272 281 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC5A6Q9Y289 635 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ATG2BQ96BY7 2078 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TSC2P49815 1807 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 VPS13AQ96RL7 3174 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ANTXRLA6NF34 631 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 C17orf100A8MU93 164 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 AZIN1O14977 448 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ARPC3O15145 178 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 STX7O15400 261 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 NDUFS4O43181 175 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 LRATO95237 230 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 FABP1P07148 127 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 NDST2P52849 883 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 NUP107P57740 925 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TNK1Q13470 666 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ADGRE1Q14246 886 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PTGR1Q14914 329 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 FAM189A2Q15884 450 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 AMZ1Q400G9 498 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 GTDC1Q4AE62 458 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PYCR3Q53H96 274 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 C6orf183Q5T699 404 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PYHIN1Q6K0P9 492 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ETV3LQ6ZN32 361 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ANKRD33Q7Z3H0 272 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SPRED2Q7Z698 418 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZFAND4Q86XD8 727 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PGAM4Q8N0Y7 254 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CPXM2Q8N436 756 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CBR4Q8N4T8 237 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SORCS1Q8WY21 1168 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 LZICQ8WZA0 190 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC25A36Q96CQ1 311 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ITCHQ96J02 903 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DCUN1D5Q9BTE7 237 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 KCNN2Q9H2S1 579 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF768Q9H5H4 540 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 C11orf49Q9H6J7 331 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 GPR35Q9HC97 309 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 AP5S1Q9NUS5 200 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TMEM248Q9NWD8 314 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 RHBDL2Q9NX52 303 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 AP4S1Q9Y587 144 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 KLF2Q9Y5W3 355 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PRSS21Q9Y6M0 314 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CFAP54Q96N23 3096 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MIA3Q5JRA6 1907 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 H3BSA7 217 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ACOT8O14734 319 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DENRO43583 198 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PRAMEF11O60813 436 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 OAZ2O95190 189 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CHRM5P08912 532 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 S1PR1P21453 382 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ACADLP28330 430 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PCSK6P29122 969 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 GSSP48637 474 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MAT1AQ00266 395 aaKnown RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PIGFQ07326 219 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 EXT1Q16394 746 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms