RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ACTRT3Q9BYD9 372 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 AKTIPQ9H8T0 292 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 GPATCH2Q9NW75 528 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 JKAMPQ9P055 326 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 SNX8Q9Y5X2 465 aa13.45□□□□□ -0.26
SMIM11A-203ENST00000399299 CELSR1Q9NYQ6 3014 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 A0A1W2PQD3 144 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 OR2M5A3KFT3 312 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 NDUFB5O43674 189 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 POU3F2P20265 443 aaPredicted RBP13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 TCEA1P23193 301 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 SLC18A1P54219 525 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 EEFSECP57772 596 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 EEF1A1P68104 462 aaKnown RBP13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 OCRLQ01968 901 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 BST1Q10588 318 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 TP53BP2Q13625 1128 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 TMEM44Q2T9K0 475 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 EEF1A1P5Q5VTE0 462 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 BHLHB9Q6PI77 547 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 FIGNL1Q6PIW4 674 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 GRAMD2AQ8IUY3 354 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 MEIOBQ8N635 442 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 OR8J2Q8NGG1 315 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 NUDT8Q8WV74 236 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 YIPF4Q9BSR8 244 aa13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 FAF1Q9UNN5 650 aaPredicted RBP13.44□□□□□ -0.26
SMIM11A-203ENST00000399299 A0A087WZY1 265 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 TMEM120BA0PK00 339 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 SCDO00767 359 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 HPGDP15428 266 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 ZNF17P17021 662 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 UQCRC1P31930 480 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 HBA1P69905 142 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 SORDQ00796 357 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 SPDYE7PQ495Y7 208 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 GALNT10Q86SR1 603 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 ADAMTS15Q8TE58 950 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 CDS1Q92903 461 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 TESCQ96BS2 214 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 OTUB1Q96FW1 271 aaPredicted RBP13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 DPY30Q9C005 99 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 FBXO34Q9NWN3 711 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 ZNF337Q9Y3M9 751 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 AP4B1Q9Y6B7 739 aa13.43□□□□□ -0.26
SMIM11A-203ENST00000399299 C7orf72A4D263 438 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CFLARO15519 480 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 TNFRSF21O75509 655 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CRHP06850 196 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 ATP6V1C1P21283 382 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 KIR2DL3P43628 341 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CLDN15P56746 228 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 WDR4P57081 412 aaKnown RBP13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 FOXF2Q12947 444 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 DPY19L1Q2PZI1 675 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CCNJQ5T5M9 372 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 OR4F3Q6IEY1 312 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 OR2A2Q6IF42 318 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 OGFOD2Q6N063 350 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CHMP1BQ7LBR1 199 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 KIF18BQ86Y91 864 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 ANKRD42Q8N9B4 389 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 RAB3IL1Q8TBN0 382 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 CHMP6Q96FZ7 201 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 PAIP2Q9BPZ3 127 aaKnown RBP13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 NUF2Q9BZD4 464 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 STOML1Q9UBI4 398 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 ZNF175Q9Y473 711 aa13.42□□□□□ -0.26
SMIM11A-203ENST00000399299 SLC22A20A6NK97 555 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 EEF1E1-BLOC1S5C9J1V9 151 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 H3BML4 177 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 EEF1E1O43324 174 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 SNNO75324 88 aaPredicted RBP13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 TGM6O95932 706 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 LBPP18428 481 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 CLNS1AP54105 237 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 DCST2Q5T1A1 773 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 CDH24Q86UP0 819 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 UBQLNLQ8IYU4 475 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 GCNT2Q8N0V5 402 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 GTPBP8Q8N3Z3 284 aaPredicted RBP13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 METTL25Q8N6Q8 603 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 ZNF527Q8NB42 609 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 OR5AK3PQ8NH89 298 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 FAM222BQ8WU58 562 aa13.41□□□□□ -0.26
SMIM11A-203ENST00000399299 ZBTB8AQ96BR9 441 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms