RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NR2F1P10589 423 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ATP6V1C1P21283 382 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MST1P26927 711 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ATP12AP54707 1039 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PSME3P61289 254 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 KCNJ2P63252 427 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SLC25A3Q00325 362 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TBCELQ5QJ74 424 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SLC30A6Q6NXT4 461 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C6orf89Q6UWU4 347 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SERPINA11Q86U17 422 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SIAH3Q8IW03 269 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CISD2Q8N5K1 135 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GATSQ8NAP1 163 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NSL1Q96IY1 281 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 UBQLN3Q9H347 655 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PIF1Q9H611 641 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 UBQLN4Q9NRR5 601 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 KLRF1Q9NZS2 232 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CORO2BQ9UQ03 480 aa11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PRRC2CQ9Y520 2896 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 A0A1W2PQD3 144 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 AGAP5A6NIR3 686 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 KLRC4-KLRK1H3BQV0 150 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GNB5O14775 395 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SNX4O95219 450 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PGM3O95394 542 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ANGPTL1O95841 491 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CRYBA2P53672 197 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 MLLT10P55197 1068 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PCBP3P57721 371 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 RPP38P78345 283 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CDK6Q00534 326 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ART3Q13508 389 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HYAL4Q2M3T9 481 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TIGD3Q6B0B8 471 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OR5M10Q6IEU7 315 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 RINLQ6ZS11 566 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TMEM251Q8N6I4 163 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FADS6Q8N9I5 356 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF524Q96C55 264 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF597Q96LX8 424 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GNRHR2Q96P88 292 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ASF1BQ9NVP2 202 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 THUMPD1Q9NXG2 353 aaKnown RBP11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TMEM181Q9P2C4 612 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PACSIN3Q9UKS6 424 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CHST2Q9Y4C5 530 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 DTNAQ9Y4J8 743 aa11.32□□□□□ -0.6
HLA-DQB1-203ENST00000399082 IGLV3-32A0A0A0MS00 114 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C15orf38-AP3S2A0A0A6YYH1 394 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM220BPB1ANY3 271 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CELA3AP09093 270 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PCGF2P35227 344 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 GSK3BP49841 420 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CRISP3P54108 245 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HPCAP84074 193 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 RBBP4Q09028 425 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SCARB2Q14108 478 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FGFBP1Q14512 234 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CYP51A1Q16850 503 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 VMACQ2NL98 169 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 REEP3Q6NUK4 255 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 CBLN3Q6UW01 205 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 COMTD1Q86VU5 262 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 PGAM4Q8N0Y7 254 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 FAM71CQ8NEG0 241 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ARSGQ96EG1 525 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 REXO5Q96IC2 774 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SLX1AQ9BQ83 275 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 HOXD1Q9GZZ0 328 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
HLA-DQB1-203ENST00000399082 SUCOQ9UBS9 1254 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms