RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CLDN14O95500 239 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 NGFRP08138 427 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 OR12D1P0DN82 309 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 GABRA1P14867 456 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 HPGDP15428 266 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ATP6V1C1P21283 382 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 HTR1EP28566 365 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CHI3L1P36222 383 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ADH7P40394 386 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SRYQ05066 204 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SAXO2Q658L1 398 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ARSKQ6UWY0 536 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 ZNF621Q6ZSS3 439 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 MIER2Q8N344 545 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 OR5M1Q8NGP8 315 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 CA5BP1Q8WTZ4 195 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SFXN2Q96NB2 322 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SDF2Q99470 211 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 KLHDC3Q9BQ90 382 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 SLC6A13Q9NSD5 602 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 COQ3Q9NZJ6 369 aa12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 MRPS18CQ9Y3D5 142 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-202ENST00000399079 A0A0G2JNJ9 132 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DUXAA6NLW8 204 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AHRRA9YTQ3 701 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SCDO00767 359 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FCMRO60667 390 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ACTL6AO96019 429 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 IL6P05231 212 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HK1P19367 917 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DCTP40126 519 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 POLR2JP52435 117 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 B3GALT5-AS1P59052 145 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TIGD2Q4W5G0 525 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SP5Q6BEB4 398 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PLXDC2Q6UX71 529 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DNAJC14Q6Y2X3 702 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RNF130Q86XS8 419 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MIPOL1Q8TD10 442 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NEURL3Q96EH8 262 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 UCK2Q9BZX2 261 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PTGES2Q9H7Z7 377 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 Q9UFV3 132 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 VDAC3Q9Y277 283 aa12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PHF3Q92576 2039 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-202ENST00000399079 UNC79Q9P2D8 2635 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 IGLV3-32A0A0A0MS00 114 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 C19orf84I3L1E1 186 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RFXANKO14593 260 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 EDF1O60869 148 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TOXO94900 526 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 SOX30O94993 753 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HOXD4P09016 255 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LCN1P31025 176 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GCKP35557 465 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 LHX2P50458 406 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 GPR68Q15743 365 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF630Q2M218 657 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KLHL26Q53HC5 615 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 AAGABQ6PD74 315 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ENPP6Q6UWR7 440 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 ZNF614Q8N883 585 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CHDHQ8NE62 594 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 C1GALT1C1Q96EU7 318 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NPAS1Q99742 590 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 MKLN1Q9UL63 735 aa12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KLF2Q9Y5W3 355 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-202ENST00000399079 KIAA1549Q9HCM3 1950 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CENPVL1A0A0U1RR11 272 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 A0A1W2PQD3 144 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 PRAMEF27A3QJZ7 478 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NKX2-6A6NCS4 301 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 NPIPB9F8W1W9 429 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 HMGN4O00479 90 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 OIP5O43482 229 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 EPPINO95925 133 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CPN1P15169 458 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CD1EP15812 388 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CHMP24386 653 aa12.75□□□□□ -0.37
HLA-DQB1-202ENST00000399079 CHRNB4P30926 498 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms