RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 UCHL1P09936 223 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 OPRL1P41146 370 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TSFMP43897 325 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 SCRN3Q0VDG4 424 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC18B1Q6NT16 456 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF595Q8IYB9 648 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 HAVCR2Q8TDQ0 301 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 NXPE2Q96DL1 559 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 OLAHQ9NV23 265 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 B4GALT7Q9UBV7 327 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 GMEB1Q9Y692 573 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 DISC1C4P0D8 188 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 J3KTA2 159 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ARRB2P32121 409 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TCTN2Q96GX1 697 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 NT5DC2Q9H857 520 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 LRIT1Q9P2V4 623 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TRAV6A0A075B6T7 132 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 A8MVJ9 347 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 SYNGR4O95473 234 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ERCC1P07992 297 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 CHMP24386 653 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 RAB38P57729 211 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 PHC1P78364 1004 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ABHD17CQ6PCB6 329 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 IL22RA1Q8N6P7 574 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ELSPBP1Q96BH3 223 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 MCOLN1Q9GZU1 580 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR51E2Q9H255 320 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 MCM3APO60318 1980 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 K7ESM1 405 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 DAPP51397 102 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TSPAN31Q12999 210 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 PGGHGQ32M88 737 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 C1orf94Q6P1W5 598 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 GDPD1Q8N9F7 314 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZMYND19Q96E35 227 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 MSANTD3Q96H12 275 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 A0A1W2PQL4 384 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 IFNA7P01567 189 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 PKLRP30613 574 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 RGS6P49758 472 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 PLP2Q04941 152 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TBC1D25Q3MII6 688 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 NDNFQ8TB73 568 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 WDR77Q9BQA1 342 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 GLIPR2Q9H4G4 154 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF304Q9HCX3 659 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 ASB1Q9Y576 335 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TNFRSF10CO14798 259 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 AP1G1O43747 822 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 IFNA21P01568 189 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 GDI2P50395 445 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF91Q05481 1191 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TDGQ13569 410 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM217AQ8IXS0 508 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 SYT14Q8NB59 555 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM163Q8TC26 289 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 GGHQ92820 318 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 C16orf58Q96GQ5 468 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR4K3Q96R72 315 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 ADOQ96SZ5 270 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 CBLCQ9ULV8 474 aa13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 NOP16Q9Y3C1 178 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-201ENST00000398587 MAOBP27338 520 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR1Q1Q15612 314 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 PARM1Q6UWI2 310 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 CYHR1Q6ZMK1 362 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 MEX3DQ86XN8 651 aaKnown RBP13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 NAT6Q93015 286 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 TTC3P53804 2025 aa13.33□□□□□ -0.27
PCDHGA11-201ENST00000398587 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 SYT5O00445 386 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 PTTG1O95997 202 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 APOC1P02654 83 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 FCER2P06734 321 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 ADH7P40394 386 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 RABEPKQ7Z6M1 372 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 ALDH16A1Q8IZ83 802 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 DDIT4LQ96D03 193 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 KLHL15Q96M94 604 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms