RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CLEC4AQ9UMR7 237 aa10.78□□□□□ -0.68
TFF3-202ENST00000398431 COL6A5A8TX70 2615 aa10.77□□□□□ -0.68
TFF3-202ENST00000398431 UTS2O95399 124 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 OPN1LWP04000 364 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 SHBGP04278 402 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 TAC1P20366 129 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 ATP5F1P24539 256 aaPredicted RBP10.77□□□□□ -0.69
TFF3-202ENST00000398431 GABRA3P34903 492 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 GSTM5P46439 218 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 RPS3AP61247 264 aaKnown RBP10.77□□□□□ -0.69
TFF3-202ENST00000398431 IFFO1Q0D2I5 559 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 SGCBQ16585 318 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 GRAMD1BQ3KR37 738 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 CEP85LQ5SZL2 805 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 LGSNQ5TDP6 509 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 AGBL2Q5U5Z8 902 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 ZNF704Q6ZNC4 412 aaPredicted RBP10.77□□□□□ -0.69
TFF3-202ENST00000398431 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 OR6K3Q8NGY3 331 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 OR4C3Q8NH37 302 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.69
TFF3-202ENST00000398431 SPATA3Q8NHX4 192 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 L3HYPDHQ96EM0 354 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 GSTO2Q9H4Y5 243 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 SENP1Q9P0U3 644 aa10.77□□□□□ -0.69
TFF3-202ENST00000398431 RRP15Q9Y3B9 282 aaKnown RBP10.77□□□□□ -0.69
TFF3-202ENST00000398431 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 A0A0J9YW62 118 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 EIF1AYO14602 144 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 ADAMDEC1O15204 470 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 GMFGO60234 142 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 SS18L1O75177 396 aaPredicted RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 CRLF1O75462 422 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 SLITRK5O94991 958 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 ENO1P06733 434 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 NID1P14543 1247 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 PPP3CBP16298 524 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 EIF1AXP47813 144 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 RFX3P48380 749 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 CLK3P49761 638 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 NR1H2P55055 460 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 PKNOX1P55347 436 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 ZNF763Q0D2J5 394 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 LCP2Q13094 533 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 TNK1Q13470 666 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 KIAA0040Q15053 153 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 MFSD12Q6NUT3 480 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 CXXC5Q7LFL8 322 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 ZNF551Q7Z340 670 aaPredicted RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 ZNF611Q8N823 705 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 OR10D3Q8NH80 312 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 FAM110BQ8TC76 370 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 BCAS4Q8TDM0 211 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 TMEM171Q8WVE6 324 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 PIK3R3Q92569 461 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 GFM2Q969S9 779 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 PLPPR2Q96GM1 343 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 GMPPAQ96IJ6 420 aaPredicted RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 EGLN2Q96KS0 407 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 RASSF4Q9H2L5 321 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 TMBIM4Q9HC24 238 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 Q9N2J8 555 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 MYNNQ9NPC7 610 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 WBP11Q9Y2W2 641 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 CCL27Q9Y4X3 112 aa10.76□□□□□ -0.69
TFF3-202ENST00000398431 ANK3Q12955 4377 aaKnown RBP10.76□□□□□ -0.69
TFF3-202ENST00000398431 CHD3Q12873 2000 aaKnown RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 EXOC1LA0A1B0GW35 172 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 ALG1L2C9J202 215 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 OVOL3O00110 214 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 HS3ST1O14792 307 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 CXCL13O43927 109 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 TMCC2O75069 709 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 NKX2-2O95096 273 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 IFI6P09912 130 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 FCGR2AP12318 317 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 PPP2R2BQ00005 443 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 SPDYAQ5MJ70 313 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 TRIM46Q7Z4K8 759 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 ZAR1Q86SH2 424 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 GALNT10Q86SR1 603 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 TDRPQ86YL5 185 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 GTPBP8Q8N3Z3 284 aaPredicted RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 OR2W6PQ8NHA6 318 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 CDC26Q8NHZ8 85 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 RAB3IL1Q8TBN0 382 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 POC1BQ8TC44 478 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 ARL8AQ96BM9 186 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 GIMAP5Q96F15 307 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 PRRG4Q9BZD6 226 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 TBL1XR1Q9BZK7 514 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 OR10A4Q9H209 315 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 TNFRSF12AQ9NP84 129 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 MID1IP1Q9NPA3 183 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 DDX18Q9NVP1 670 aaKnown RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 FBXO34Q9NWN3 711 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 MRTO4Q9UKD2 239 aaKnown RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 VDAC3Q9Y277 283 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 GPR52Q9Y2T5 361 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms