RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 LIX1LQ8IVB5 337 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 CHDHQ8NE62 594 aaPredicted RBP15.13■□□□□ 0.01
APTR-201ENST00000398043 OR4K17Q8NGC6 315 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 OR5D16Q8NGK9 328 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 OR4A15Q8NGL6 344 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 ZPLD1Q8TCW7 415 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 ADAMTS15Q8TE58 950 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 CA5BP1Q8WTZ4 195 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 C1GALT1C1Q96EU7 318 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 KLHDC3Q9BQ90 382 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 TBL1XR1Q9BZK7 514 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 SDR39U1Q9NRG7 319 aaPredicted RBP15.13■□□□□ 0.01
APTR-201ENST00000398043 ZNF446Q9NWS9 450 aa15.13■□□□□ 0.01
APTR-201ENST00000398043 FAF1Q9UNN5 650 aaPredicted RBP15.13■□□□□ 0.01
APTR-201ENST00000398043 RNF103-CHMP3A0A140T963 221 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 CD8B2A6NJW9 211 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 PGRP06401 933 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 IDO1P14902 403 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 ZNF708P17019 499 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 IGFBP2P18065 325 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 UQCRC2P22695 453 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 S100A3P33764 101 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 SOAT1P35610 550 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 TIMP3P35625 211 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 STARP49675 285 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 CLK3P49761 638 aaKnown RBP15.12■□□□□ 0.01
APTR-201ENST00000398043 CD226Q15762 336 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 KLHL26Q53HC5 615 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 HEPHL1Q6MZM0 1159 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 LACC1Q8IV20 430 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 NAXEQ8NCW5 288 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 TNIP2Q8NFZ5 429 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 LRRC8CQ8TDW0 803 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 DTNBP1Q96EV8 351 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 MARK4Q96L34 752 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 UCN2Q96RP3 112 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 SDF2Q99470 211 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 UCK2Q9BZX2 261 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 ENKD1Q9H0I2 346 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 DKKL1Q9UK85 242 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 CAMK2AQ9UQM7 478 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 RPH3AQ9Y2J0 694 aaPredicted RBP15.12■□□□□ 0.01
APTR-201ENST00000398043 FBN2P35556 2912 aa15.12■□□□□ 0.01
APTR-201ENST00000398043 MBD3L4A6NDZ8 208 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 MBD3L3A6NE82 208 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 MBD3L5A6NJ08 208 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 HNRNPRO43390 633 aaKnown RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 NDUFB5O43674 189 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 TGDSO95455 350 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 CPSF4O95639 269 aaKnown RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 MATN1P21941 496 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 CDKN2CP42773 168 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 MRPL19P49406 292 aaKnown RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 CLDN15P56746 228 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 BCL2A1Q16548 175 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 GSTA3Q16772 222 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 GLYR1Q49A26 553 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.11■□□□□ 0.01
APTR-201ENST00000398043 NXNQ6DKJ4 435 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 ENPP6Q6UWR7 440 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 GLB1L3Q8NCI6 653 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 VPS37AQ8NEZ2 397 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 MBD3L2Q8NHZ7 208 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 CKAP2Q8WWK9 683 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 NEURL3Q96EH8 262 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 SFXN2Q96NB2 322 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 TUBA1CQ9BQE3 449 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 INPP5KQ9BT40 448 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 CALHM2Q9HA72 323 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 NPDC1Q9NQX5 325 aaPredicted RBP15.11■□□□□ 0.01
APTR-201ENST00000398043 KCNE5Q9UJ90 142 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 PCDHGB4Q9UN71 923 aa15.11■□□□□ 0.01
APTR-201ENST00000398043 NPIPA5A0A0B4J1W7 369 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 OR2M5A3KFT3 312 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 NKX2-6A6NCS4 301 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 DUXAA6NLW8 204 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 NPIPA7E9PJI5 369 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 DIAPH2O60879 1101 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 NPIPA8P0DM63 369 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 PRF1P14222 555 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 HK1P19367 917 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 IDH3AP50213 366 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 FUT5Q11128 374 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 ARHGAP11BQ3KRB8 267 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 AAGABQ6PD74 315 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 ARSKQ6UWY0 536 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 GATSQ8NAP1 163 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 OR10Q1Q8NGQ4 319 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 MARVELD3Q96A59 401 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 SLC35G5Q96KT7 338 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 OR52E6Q96RD3 313 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 NPAS1Q99742 590 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 EBF4Q9BQW3 602 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 OR51I1Q9H343 314 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 PTGES2Q9H7Z7 377 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 HHATLQ9HCP6 504 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 INTS9Q9NV88 658 aaKnown RBP15.1■□□□□ 0.01
APTR-201ENST00000398043 ZIM2Q9NZV7 527 aa15.1■□□□□ 0.01
APTR-201ENST00000398043 CLCF1Q9UBD9 225 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms