RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 ST3GAL3Q11203 375 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SRSF5Q13243 272 aaKnown RBP20.38■□□□□ 0.85
NFIX-203ENST00000397661 ARL9Q6T311 187 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 FRMD1Q8N878 549 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 WDFY2Q96P53 400 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 HCAR1Q9BXC0 346 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 GON7Q9BXV9 100 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 MRPS7Q9Y2R9 242 aaKnown RBP20.38■□□□□ 0.85
NFIX-203ENST00000397661 A0A1W2PQU0 124 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 GABRPO00591 440 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 CLUP10909 449 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SLC3A1Q07837 685 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 RAB40BQ12829 278 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 RPTNQ6XPR3 784 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SYT9Q86SS6 491 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 CCDC28AQ8IWP9 274 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 FAM109AQ8N4B1 249 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 NATD1Q8N6N6 113 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 GDPD1Q8N9F7 314 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 OR51A7Q8NH64 312 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 PFN4Q8NHR9 129 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SLC41A3Q96GZ6 507 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SENP5Q96HI0 755 aaPredicted RBP20.38■□□□□ 0.85
NFIX-203ENST00000397661 KXD1Q9BQD3 176 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 CDCP1Q9H5V8 836 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 KLHL28Q9NXS3 571 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 SF3B6Q9Y3B4 125 aaKnown RBP20.38■□□□□ 0.85
NFIX-203ENST00000397661 SPEF1Q9Y4P9 236 aa20.38■□□□□ 0.85
NFIX-203ENST00000397661 PEBP1P30086 187 aaKnown RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 TRMT12Q53H54 448 aaKnown RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 KIAA1211LQ6NV74 962 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 BHLHB9Q6PI77 547 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 GDF7Q7Z4P5 450 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 OR51L1Q8NGJ5 315 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 GRHL3Q8TE85 626 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 LCN9Q8WX39 176 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 MKRN2Q9H000 416 aaKnown RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 C11orf49Q9H6J7 331 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 ASCC3Q8N3C0 2202 aaKnown RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 A0A0G2JPF8 293 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 HNRNPCL2B2RXH8 293 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 HNRNPCL3B7ZW38 293 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 EMC8O43402 210 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 HNRNPCL4P0DMR1 293 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 ENDOUP21128 410 aaKnown RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 GJA4P35212 333 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 PDGFRLQ15198 375 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 C3orf38Q5JPI3 329 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 ASB16Q96NS5 453 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 PINK1Q9BXM7 581 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 IL23AQ9NPF7 189 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 PHPT1Q9NRX4 125 aaPredicted RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 C20orf141Q9NUB4 165 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 WDR45Q9Y484 360 aa20.37■□□□□ 0.85
NFIX-203ENST00000397661 SIRT4Q9Y6E7 314 aaPredicted RBP20.37■□□□□ 0.85
NFIX-203ENST00000397661 LRRC72A6NJI9 287 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 PAHP00439 452 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 ERGP11308 486 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 F3P13726 295 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TBXA2RP21731 343 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 ACVR1BP36896 505 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 OMPP47874 163 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TSPAN31Q12999 210 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 SLC48A1Q6P1K1 146 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 OR2L5Q8NG80 312 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 ARHGAP9Q9BRR9 750 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 ING3Q9NXR8 418 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TNFRSF10DQ9UBN6 386 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 FBXL4Q9UKA2 621 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 COL4A3Q01955 1670 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 SNTNA6NMZ2 147 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 PRMT2P55345 433 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 HTRA4P83105 476 aaPredicted RBP20.36■□□□□ 0.85
NFIX-203ENST00000397661 MRPL28Q13084 256 aaKnown RBP20.36■□□□□ 0.85
NFIX-203ENST00000397661 MINDY4Q4G0A6 757 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 PRR23CQ6ZRP0 262 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 DNAJC5GQ8N7S2 189 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 SLC37A3Q8NCC5 494 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 LYRM1O43325 122 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 SERPINI2O75830 405 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TRAPPC2P0DI81 140 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TRAPPC2BP0DI82 140 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 GSTM3P21266 225 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 CPN2P22792 545 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 HCCSP53701 268 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 LAMTOR1Q6IAA8 161 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 QSOX2Q6ZRP7 698 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 DIO2Q92813 273 aa20.36■□□□□ 0.85
NFIX-203ENST00000397661 TSACCQ96A04 125 aaPredicted RBP20.36■□□□□ 0.85
NFIX-203ENST00000397661 USP36Q9P275 1121 aaKnown RBP20.36■□□□□ 0.85
NFIX-203ENST00000397661 PEX12O00623 359 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 PAICSP22234 425 aaKnown RBP20.35■□□□□ 0.85
NFIX-203ENST00000397661 IFNGR2P38484 337 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 OR10A3P58181 314 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 NDUFA9Q16795 377 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 FAM109BQ6ICB4 259 aaPredicted RBP20.35■□□□□ 0.85
NFIX-203ENST00000397661 KRT74Q7RTS7 529 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 SMARCD2Q92925 531 aa20.35■□□□□ 0.85
NFIX-203ENST00000397661 RPP25Q9BUL9 199 aaKnown RBP20.35■□□□□ 0.85
NFIX-203ENST00000397661 RBCK1Q9BYM8 510 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms