RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GXYLT2A0PJZ3 443 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 RCBTB2O95199 551 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 HK1P19367 917 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 POU3F2P20265 443 aaPredicted RBP12.63□□□□□ -0.39
SEC13-204ENST00000397099 MAGOHP61326 146 aaKnown RBP12.63□□□□□ -0.39
SEC13-204ENST00000397099 TXNL4AP83876 142 aaKnown RBP12.63□□□□□ -0.39
SEC13-204ENST00000397099 PGS1Q32NB8 556 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 RAET1LQ5VY80 246 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 SEM1Q6ZVN7 128 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 MARCH3Q86UD3 253 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 KRTCAP2Q8N6L1 136 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 ZBTB8AQ96BR9 441 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 TLCD1Q96CP7 247 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 CHMP6Q96FZ7 201 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 C20orf27Q9GZN8 174 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 TMBIM4Q9HC24 238 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 MCCC2Q9HCC0 563 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
SEC13-204ENST00000397099 PAQR5Q9NXK6 330 aaPredicted RBP12.63□□□□□ -0.39
SEC13-204ENST00000397099 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
SEC13-204ENST00000397099 C7orf72A4D263 438 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 KLF11O14901 512 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 SNNO75324 88 aaPredicted RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 OXSR1O95747 527 aaPredicted RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 C6orf47O95873 294 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 IGKV1D-16P01601 117 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 TMIGD3P0DMS9 266 aaPredicted RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 BMP5P22003 454 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 DGKQP52824 942 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 CLDN18P56856 261 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 RPS3AP61247 264 aaKnown RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 HBA1P69905 142 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 FGFBP1Q14512 234 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 DCST1Q5T197 706 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 AGBL2Q5U5Z8 902 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 OR4C3Q8NH37 302 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 NUF2Q9BZD4 464 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 PIGMQ9H3S5 423 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 ZNF395Q9H8N7 513 aaPredicted RBP12.62□□□□□ -0.39
SEC13-204ENST00000397099 EXD2Q9NVH0 621 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 MED11Q9P086 117 aa12.62□□□□□ -0.39
SEC13-204ENST00000397099 CLCA1A8K7I4 914 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 HCRTR2O43614 444 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 TNFRSF21O75509 655 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 GOSR1O95249 250 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 GUSBP08236 651 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 FCGR2AP12318 317 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 SOAT1P35610 550 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 EIF1P41567 113 aaKnown RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 ANXA11P50995 505 aaKnown RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 ZNF41P51814 821 aaPredicted RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 ZNF136P52737 540 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 WDR4P57081 412 aaKnown RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 B3GALT5-AS1P59052 145 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 KRTAP10-9P60411 292 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 SORDQ00796 357 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 SRYQ05066 204 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 STX5Q13190 355 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 CASP8Q14790 479 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 GRAMD2AQ8IUY3 354 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 LIX1LQ8IVB5 337 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 TRIML2Q8N7C3 387 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 C16orf58Q96GQ5 468 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 ZBTB18Q99592 522 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 ZNF559Q9BR84 538 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 GPATCH2Q9NW75 528 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 RPH3AQ9Y2J0 694 aaPredicted RBP12.61□□□□□ -0.39
SEC13-204ENST00000397099 ZNF175Q9Y473 711 aa12.61□□□□□ -0.39
SEC13-204ENST00000397099 MED12Q93074 2177 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 OR2M5A3KFT3 312 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 E9PBE3 544 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 IDO1P14902 403 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 EFNA1P20827 205 aaPredicted RBP12.6□□□□□ -0.39
SEC13-204ENST00000397099 UQCRC2P22695 453 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ME2P23368 584 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ADH6P28332 368 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 PCYT1AP49585 367 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ATP12AP54707 1039 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 MYBPHQ13203 477 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 DCST2Q5T1A1 773 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 ATAD3BQ5T9A4 648 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 OR4F3Q6IEY1 312 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 C6orf120Q7Z4R8 191 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 CDH24Q86UP0 819 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
SEC13-204ENST00000397099 MED12LQ86YW9 2145 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms