RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 HS6ST1O60243 411 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 SEMA7AO75326 666 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 E2F6O75461 281 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 PPM1BO75688 479 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 UTS2O95399 124 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 NADKO95544 446 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-209ENST00000397036 HPRP00739 348 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 THRBP10828 461 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF23P17027 643 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 F8A1P23610 371 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 IFNA8P32881 189 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 HSPA13P48723 471 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 PLCXD2Q0VAA5 305 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 DGCR6Q14129 220 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 NNATQ16517 81 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 BTBD16Q32M84 506 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 CMPK2Q5EBM0 449 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 COLEC12Q5KU26 742 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 MRPL2Q5T653 305 aaKnown RBP12.52□□□□□ -0.4
MCF2L-209ENST00000397036 FNDC7Q5VTL7 733 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 FAM69BQ5VUD6 431 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 RAB43Q86YS6 212 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 LACC1Q8IV20 430 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 CBR4Q8N4T8 237 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 OR4C15Q8NGM1 316 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 RNF138Q8WVD3 245 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 TTC9Q92623 222 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 SDCCAG3Q96C92 435 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 OMA1Q96E52 524 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF597Q96LX8 424 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 PRRC1Q96M27 445 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 RDH12Q96NR8 316 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 WFDC6Q9BQY6 131 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 NMNAT1Q9HAN9 279 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-209ENST00000397036 SAMHD1Q9Y3Z3 626 aaKnown RBP12.52□□□□□ -0.4
MCF2L-209ENST00000397036 LYVE1Q9Y5Y7 322 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 SAC3D1A6NKF1 404 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ALG1L2C9J202 215 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 M0R3H8 397 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 TNFRSF11BO00300 401 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 SOCS2O14508 198 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 DIRAS1O95057 198 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 OXSR1O95747 527 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 IL12BP29460 328 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RRM2P31350 389 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ALDH3A2P51648 485 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF136P52737 540 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RGS8P57771 180 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 PPP2R2BQ00005 443 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 CHAF1BQ13112 559 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 NPTX1Q15818 432 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RSPO4Q2I0M5 234 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 H3F3CQ6NXT2 135 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF550Q7Z398 422 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 OFCC1Q8IZS5 231 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 FAM71CQ8NEG0 241 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 SLC22A8Q8TCC7 542 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 EFHD2Q96C19 240 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 LMF1Q96S06 567 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 ADOQ96SZ5 270 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RBM4BQ9BQ04 359 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RBM4Q9BWF3 364 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 HHATLQ9HCP6 504 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 RLIMQ9NVW2 624 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 P4HTMQ9NXG6 502 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 VNN3Q9NY84 501 aa12.52□□□□□ -0.41
MCF2L-209ENST00000397036 TESQ9UGI8 421 aaKnown RBP12.52□□□□□ -0.41
MCF2L-209ENST00000397036 NPIPA5A0A0B4J1W7 369 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 NPIPA7E9PJI5 369 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 H3BNH8 94 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 PDLIM1O00151 329 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 SCDO00767 359 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 CDK2AP1O14519 115 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 AP3D1O14617 1153 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 TPST2O60704 377 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 OR5F1O95221 314 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 GADD45GO95257 159 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 ALPLP05186 524 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 SERPINA7P05543 415 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 H1F0P07305 194 aaKnown RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 FBXO45P0C2W1 286 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 NPIPA8P0DM63 369 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 LIPCP11150 499 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 CYP4B1P13584 511 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 RFX3P48380 749 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 IST1P53990 364 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 RPS18P62269 152 aaKnown RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 PLAURQ03405 335 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 DAG1Q14118 895 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 MICAQ29983 383 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms