RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 UBQLN4Q9NRR5 601 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 SACM1LQ9NTJ5 587 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 TUBA8Q9NY65 449 aaPredicted RBP9.66□□□□□ -0.86
NUP98-205ENST00000397007 P2RX2Q9UBL9 471 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 TRAV17A0A0B4J275 112 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 STX11O75558 287 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 PGM3O95394 542 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 RFPL3SP0C7P2 107 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 SUMO3P55854 103 aaPredicted RBP9.66□□□□□ -0.86
NUP98-205ENST00000397007 KLRB1Q12918 225 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 CMPK2Q5EBM0 449 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 ZNF766Q5HY98 468 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 ZNF836Q6ZNA1 936 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 CYP4Z2PQ8N1L4 340 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 PCYOX1LQ8NBM8 494 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 OR4D11Q8NGI4 311 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 ASB15Q8WXK1 588 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 MIB2Q96AX9 1013 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 EFHD2Q96C19 240 aaPredicted RBP9.66□□□□□ -0.86
NUP98-205ENST00000397007 FAM173AQ9BQD7 235 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 ZNF426Q9BUY5 554 aa9.66□□□□□ -0.86
NUP98-205ENST00000397007 THY1P04216 161 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 PSME3P61289 254 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 NCALDP61601 193 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 ZNF605Q86T29 641 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 MISPQ8IVT2 679 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 PRR22Q8IZ63 422 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 ARHGAP24Q8N264 748 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 RAB8BQ92930 207 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 YIPF4Q9BSR8 244 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 TTTY12Q9BZ98 90 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 MTHFD2LQ9H903 347 aaPredicted RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 PCDHGB3Q9Y5G1 929 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 SNX8Q9Y5X2 465 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 SYT5O00445 386 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 TMED10P49755 219 aaKnown RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 GSK3BP49841 420 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 ZNF117Q03924 483 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 TP53BP2Q13625 1128 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 DECR1Q16698 335 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 LSMEM1Q8N8F7 131 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 OTUB1Q96FW1 271 aaPredicted RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 RMND5BQ96G75 393 aaPredicted RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 ADGRG7Q96K78 797 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 NPAS1Q99742 590 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 LAT2Q9GZY6 243 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 ADAM19Q9H013 955 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 FAM107BQ9H098 131 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 SPAG4Q9NPE6 437 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 GID8Q9NWU2 228 aa9.65□□□□□ -0.86
NUP98-205ENST00000397007 PRPF19Q9UMS4 504 aaKnown RBP9.65□□□□□ -0.86
NUP98-205ENST00000397007 LOC100653049A0A140TA62 436 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 EFNA2O43921 213 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 KRT34O76011 436 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 CASRP41180 1078 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 KCNJ5P48544 419 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 NRG3P56975 720 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 GCNT6Q5T4J0 391 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 SLC22A10Q63ZE4 541 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 TNFAIP8L2Q6P589 184 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 LINC00696Q6ZRV3 163 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 HIPK4Q8NE63 616 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 THAP3Q8WTV1 239 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 MAGEA2P43356 314 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 CLDN15P56746 228 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 NNATQ16517 81 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ZSWIM7Q19AV6 140 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 RPS26P11Q5JNZ5 115 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 C6orf163Q5TEZ5 329 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 REEP3Q6NUK4 255 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 COX18Q8N8Q8 333 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 GPR151Q8TDV0 419 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ADOQ96SZ5 270 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 OSBPL11Q9BXB4 747 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 GALNT9Q9HCQ5 603 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 EQTNQ9NQ60 294 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ZNF443Q9Y2A4 671 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 KLF13Q9Y2Y9 288 aaPredicted RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 NBPF19A0A087WUL8 3843 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 A6NL46 340 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 PEX1O43933 1283 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 LGI1O95970 557 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ZNF17P17021 662 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 DMTNQ08495 405 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 EPS8Q12929 822 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 RAPSNQ13702 412 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 PLPPR5Q32ZL2 321 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 IRAK1BP1Q5VVH5 260 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 TIGD3Q6B0B8 471 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 LCN8Q6JVE9 175 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ERICH5Q6P6B1 374 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 PNPT1Q8TCS8 783 aaKnown RBP9.64□□□□□ -0.87
NUP98-205ENST00000397007 GPR119Q8TDV5 335 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 ADAMTS15Q8TE58 950 aa9.64□□□□□ -0.87
NUP98-205ENST00000397007 C1GALT1C1Q96EU7 318 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms