RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SLC36A2Q495M3 483 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 TDHQ8IZJ6 230 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 BBS1Q8NFJ9 593 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 TOR1AIP2Q8NFQ8 470 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 OR5K2Q8NHB8 316 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 HSD17B8Q92506 261 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 TFGQ92734 400 aaPredicted RBP12.43□□□□□ -0.42
TRIM40-207ENST00000396581 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 SORCS2Q96PQ0 1159 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 OR2M2Q96R28 347 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 AICDAQ9GZX7 198 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 S1PR5Q9H228 398 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 ERVMER34-1Q9H9K5 563 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 HINT3Q9NQE9 182 aaKnown RBP12.43□□□□□ -0.42
TRIM40-207ENST00000396581 ENAMQ9NRM1 1142 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 GPR55Q9Y2T6 319 aaPredicted RBP12.43□□□□□ -0.42
TRIM40-207ENST00000396581 NUBP2Q9Y5Y2 271 aa12.43□□□□□ -0.42
TRIM40-207ENST00000396581 SIRT4Q9Y6E7 314 aaPredicted RBP12.43□□□□□ -0.42
TRIM40-207ENST00000396581 A0A0G2JK05 382 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 THY1P04216 161 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 HMGN1P05114 100 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 NTSP30990 170 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ACSL1P33121 698 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 TALDO1P37837 337 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 RAG2P55895 527 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 RGS1Q08116 209 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 LASP1Q14847 261 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 FAM46CQ5VWP2 391 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PYHIN1Q6K0P9 492 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZNF793Q6ZN11 406 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 SZRD1Q7Z422 152 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 TPRA1Q86W33 373 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZNF655Q8N720 491 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 OR56A1Q8NGH5 318 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 FAIM2Q9BWQ8 316 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 QRSL1Q9H0R6 528 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PTGFRNQ9P2B2 879 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 MGAT4AQ9UM21 535 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PCYT1BQ9Y5K3 369 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 KCNE3Q9Y6H6 103 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 CKAP5Q14008 2032 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 UNC80Q8N2C7 3258 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 H7BY64 318 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 SC5DO75845 299 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 CH25HO95992 272 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ANXA3P12429 323 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 F8A1P23610 371 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PRKAR1BP31321 381 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ST8SIA6P61647 398 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 NTRK2Q16620 822 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 C6orf132Q5T0Z8 1188 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PIP5KL1Q5T9C9 394 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 MRM1Q6IN84 353 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 MBOAT2Q6ZWT7 520 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 GID4Q8IVV7 300 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 NKAIN4Q8IVV8 208 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ACBD7Q8N6N7 88 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 OR2T33Q8NG76 320 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 OR11H4Q8NGC9 324 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 CLIP3Q96DZ5 547 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PRAP1Q96NZ9 151 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ABHD1Q96SE0 405 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 NRTNQ99748 197 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 DPAGT1Q9H3H5 408 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 FN3KQ9H479 309 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 NARFLQ9H6Q4 476 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 ZNF275Q9NSD4 429 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-207ENST00000396581 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 LRRK1Q38SD2 2015 aa12.42□□□□□ -0.42
TRIM40-207ENST00000396581 LRIT2A6NDA9 550 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CPSF4LA6NMK7 179 aaKnown RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SOCS6O14544 535 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PLPP2O43688 288 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 LCMT2O60294 686 aaKnown RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SOX30O94993 753 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 NTN1O95631 604 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 IFI30P13284 250 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 LAMP2P13473 410 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 C6P13671 934 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 NDUFV2P19404 249 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CSNK1G2P78368 415 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 RUNX3Q13761 415 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 TRAM1Q15629 374 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SFXN4Q6P4A7 337 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms