RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 GP1BAP07359 652 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 GSTM3P21266 225 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 FMO3P31513 532 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 GRK6P43250 576 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PPICP45877 212 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 RFX3P48380 749 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PLAURQ03405 335 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PDZK1Q5T2W1 519 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PHF19Q5T6S3 580 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 KCTD8Q6ZWB6 473 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PPP1R3BQ86XI6 285 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 RHOXF1Q8NHV9 184 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 OIT3Q8WWZ8 545 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ACOT11Q8WXI4 607 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 DAZLQ92904 295 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 UBE2FQ969M7 185 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 DGCR14Q96DF8 476 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 RASSF1Q9NS23 344 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 SCN3BQ9NY72 215 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 TPRKBQ9Y3C4 175 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 A8MUA0 341 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 POLR1CO15160 346 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 TP53P04637 393 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 HTR1AP08908 422 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 FGF5P12034 268 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 GABRB1P18505 474 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 HTR2AP28223 471 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 KRT20P35900 424 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 GSSP48637 474 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 IDH2P48735 452 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ATP12AP54707 1039 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 CDC42P60953 191 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZFP36L1Q07352 338 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 FGFBP1Q14512 234 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 NKAIN1Q4KMZ8 207 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF385CQ66K41 422 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF730Q6ZMV8 503 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 RBM44Q6ZP01 1051 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 CMIPQ8IY22 773 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF321PQ8N8H1 164 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 STT3BQ8TCJ2 826 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 CLIP3Q96DZ5 547 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR8D2Q9GZM6 311 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 DUSP21Q9H596 190 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 C14orf105Q9NVL8 296 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 PAK1IP1Q9NWT1 392 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 AASSQ9UDR5 926 aa10.58□□□□□ -0.72
SMARCAL1-203ENST00000392128 TRAPPC13A5PLN9 417 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 FRG2CA6NGY1 282 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 TPD52L2O43399 206 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 MPZL2O60487 215 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 BCAS1O75363 584 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZGLP1P0C6A0 271 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 GKN3PP0CG01 181 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRG2P13727 222 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 JUNBP17275 347 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ACP1P24666 158 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC35A2P78381 396 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 DCDP81605 110 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 OCA2Q04671 838 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 IL11RAQ14626 422 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 NNATQ16517 81 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRR23CQ6ZRP0 262 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 NKAIN4Q8IVV8 208 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 NLGN4XQ8N0W4 816 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SPARTQ8N0X7 666 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 GNPDA2Q8TDQ7 276 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SGCDQ92629 289 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMIGD2Q96BF3 282 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 POLR1BQ9H9Y6 1135 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 VCX3AQ9NNX9 186 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 OCIAD1Q9NX40 245 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF226Q9NYT6 803 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 MRPS14O60783 128 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 LDOC1O95751 146 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 CSTF2P33240 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 OMPP47874 163 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 DCAF7P61962 342 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR1Q1Q15612 314 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SMN1Q16637 294 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZBED5Q49AG3 693 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLX4IPQ5VYV7 408 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 MBOAT2Q6ZWT7 520 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 RRM2BQ7LG56 351 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 GPR141Q7Z602 305 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 P3H2Q8IVL5 708 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRSS58Q8IYP2 241 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 PIGXQ8TBF5 258 aa10.57□□□□□ -0.72
SMARCAL1-203ENST00000392128 IPCEF1Q8WWN9 437 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms