RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 PEX5LQ8IYB4 626 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 UBALD2Q8IYN6 164 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 PYROXD2Q8N2H3 581 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 COLGALT1Q8NBJ5 622 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GIMAP1Q8WWP7 306 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GLYATL1Q969I3 302 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ERO1AQ96HE7 468 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 CDKN2AIPNLQ96HQ2 116 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 RAB3IPQ96QF0 476 aaPredicted RBP0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TSPAN18Q96SJ8 248 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NPAS2Q99743 824 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NUDT16L1Q9BRJ7 211 aaKnown RBP0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 TXLNGYQ9BZA5 131 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 POLR2J2Q9GZM3 115 aaKnown RBP0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 NAPBQ9H115 298 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 POLR2J3Q9H1A7 115 aaKnown RBP0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GANQ9H2C0 597 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 SLC25A22Q9H936 323 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 IL1RAPL2Q9NP60 686 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ANKEF1Q9NU02 776 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 GDAP2Q9NXN4 497 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ANGPTL2Q9UKU9 493 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 UBQLN1Q9UMX0 589 aaKnown RBP0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 DUSP12Q9UNI6 340 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 ADGRL1O94910 1474 aa0.47□□□□□ -2.33
RNU6-1228P-201ENST00000391014 LTBP4Q8N2S1 1624 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ARPC4-TTLL3A0A0A6YYG9 625 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CHEK1O14757 476 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SLC30A4O14863 429 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ARPC1BO15143 372 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 HCN1O60741 890 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 GLCEO94923 617 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SLC16A8O95907 504 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 MOSP00540 346 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CD55P08174 381 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SERPINF2P08697 491 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CPA3P15088 417 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CCNA2P20248 432 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 COX7A1P24310 79 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 COL8A2P25067 703 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RDXP35241 583 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 GCKP35557 465 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 FRKP42685 505 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RPL29P47914 159 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 EMDP50402 254 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ZNF41P51814 821 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CRISP1P54107 249 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RPS6P62753 249 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 HERV-K104P63124 156 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 NPRL3Q12980 569 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RAB35Q15286 201 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 TEX44Q53QW1 395 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 C1orf141Q5JVX7 400 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CASC10Q5T4H9 136 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SHISA6Q6ZSJ9 500 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 COX15Q7KZN9 410 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ARMCX2Q7L311 632 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CAMK2N1Q7Z7J9 78 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 LCA5Q86VQ0 697 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SKA3Q8IX90 412 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 NHLRC2Q8NBF2 726 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 OR2T33Q8NG76 320 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 OR52I1Q8NGK6 324 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SELENOMQ8WWX9 145 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 P3H4Q92791 437 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 TMEM80Q96HE8 168 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 EPSTI1Q96J88 318 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 PARK7Q99497 189 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 NDFIP1Q9BT67 221 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CENPOQ9BU64 300 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RNF126Q9BV68 326 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 STARD5Q9NSY2 213 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ERVK-18Q9QC07 812 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 MBD2Q9UBB5 411 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 OR12D3Q9UGF7 316 aa0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 PURGQ9UJV8 347 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SAMD4AQ9UPU9 718 aaKnown RBP0.46□□□□□ -2.34
RNU6-1228P-201ENST00000391014 IGLV1-50A0A075B6I6 118 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 A0A1B0GW55 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 ARHGEF37A1IGU5 675 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 LRIT2A6NDA9 550 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 HELTA6NFD8 242 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 IFIT3O14879 490 aaKnown RBP0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RRP8O43159 456 aaKnown RBP0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 OR10H3O60404 316 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 POLR2MP0CAP2 368 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L2P0CJ85 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L3P0CJ86 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L5P0CJ88 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L6P0CJ89 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L7P0CJ90 424 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 C8orf89P0DMQ9 161 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 GCFC2P16383 781 aaKnown RBP0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 NLRP11P59045 1033 aaKnown RBP0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 CLPPQ16740 277 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 SPIN3Q5JUX0 258 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 FAM120AOSQ5T036 256 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 MFSD4BQ5TF39 518 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 RAET1LQ5VY80 246 aa0.45□□□□□ -2.34
RNU6-1228P-201ENST00000391014 DUX4L9Q6RFH8 374 aaPredicted RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms