RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 SLC35B4Q969S0 331 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 PPP1R14AQ96A00 147 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 OTUB1Q96FW1 271 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SLC46A1Q96NT5 459 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SDF2Q99470 211 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 PIP5K1AQ99755 562 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SLC29A1Q99808 456 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 ARHGDIGQ99819 225 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 CTRCQ99895 268 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 RBM4BQ9BQ04 359 aaKnown RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 ZPBPQ9BS86 351 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 CNPPD1Q9BV87 410 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 DDA1Q9BW61 102 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 RBM4Q9BWF3 364 aaKnown RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 RSPO3Q9BXY4 272 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 AMBRA1Q9C0C7 1298 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 STRADBQ9C0K7 418 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 OR10A5Q9H207 317 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 Q9H521 79 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 REEP1Q9H902 201 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 MTHFD2LQ9H903 347 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 APMAPQ9HDC9 416 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 PARD6AQ9NPB6 346 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SMPD3Q9NY59 655 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 VNN3Q9NY84 501 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 AKAP7Q9P0M2 348 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 NCDNQ9UBB6 729 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 CGGBP1Q9UFW8 167 aaPredicted RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 NXT1Q9UKK6 140 aaKnown RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 PPIEQ9UNP9 301 aaKnown RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 ERVK-19Q9WJR5 959 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 CFL2Q9Y281 166 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SLC9A8Q9Y2E8 581 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 RAXQ9Y2V3 346 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 IFT52Q9Y366 437 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 SAMHD1Q9Y3Z3 626 aaKnown RBP4.78□□□□□ -1.64
TRAV16-201ENST00000390444 WDR45Q9Y484 360 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 AP4B1Q9Y6B7 739 aa4.78□□□□□ -1.64
TRAV16-201ENST00000390444 MPDZO75970 2070 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 VPS13AQ96RL7 3174 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 MYOCOSA0A1B0GUC4 107 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 A0A1W2PQ72 361 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 FRG2CA6NGY1 282 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 SAGE2PA6NJ88 616 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 OR6C76A6NM76 312 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 C4orf47A7E2U8 309 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 IDSB3KWA1 339 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 NPIPB9F8W1W9 429 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 H0YAE9 185 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 PDLIM1O00151 329 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TO15178 435 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 FCMRO60667 390 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ALOX12BO75342 701 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 E2F6O75461 281 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 KCNK2O95069 426 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 EPPINO95925 133 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 IFNA16P05015 189 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 DBIP07108 87 aaKnown RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 CD63P08962 238 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 CT45A8P0DMV1 189 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 CT45A9P0DMV2 189 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TNNI3P19429 210 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 DRD5P21918 477 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 LCN1P31025 176 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 RRM2P31350 389 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 GABRA3P34903 492 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 PIGAP37287 484 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 PPICP45877 212 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 OR1E2P47887 323 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 LIMS1P48059 325 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 PGDP52209 483 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ARHGDIAP52565 204 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 LIMK1P53667 647 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 IST1P53990 364 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 PSMD4P55036 377 aaKnown RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 SLC37A1P57057 533 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 DCAF7P61962 342 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 EEF1A1P68104 462 aaKnown RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 MED21Q13503 144 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ZNF267Q14586 743 aaPredicted RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 LARS2Q15031 903 aaKnown RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 NSDHLQ15738 373 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ZSWIM7Q19AV6 140 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ISXQ2M1V0 245 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 CYP27C1Q4G0S4 372 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 LIN52Q52LA3 116 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 CT45A2Q5DJT8 189 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ZNF311Q5JNZ3 666 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 COLEC12Q5KU26 742 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 DCAF12Q5T6F0 453 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 MFSD4BQ5TF39 518 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TCTN3Q6NUS6 607 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 FAHD1Q6P587 224 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TMEM205Q6UW68 189 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 ZNF836Q6ZNA1 936 aa4.77□□□□□ -1.65
TRAV16-201ENST00000390444 WDR53Q7Z5U6 358 aaPredicted RBP4.77□□□□□ -1.65
TRAV16-201ENST00000390444 TMEM179BQ7Z7N9 219 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms