RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ONECUT2O95948 504 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 H1F0P07305 194 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 NID1P14543 1247 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 AGXTP21549 392 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 MYF6P23409 242 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 ELAVL4P26378 380 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC5A2P31639 672 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 HMGA2P52926 109 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 PLAURQ03405 335 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 CBX3Q13185 183 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 ISXQ2M1V0 245 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 MRPL14Q6P1L8 145 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 TTC33Q6PID6 262 aaPredicted RBP11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 RAB11FIP2Q7L804 512 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 ADIPOR1Q96A54 375 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC46A1Q96NT5 459 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 MUS81Q96NY9 551 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 CRB3Q9BUF7 120 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 FNDC11Q9BVV2 318 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 TRIM45Q9H8W5 580 aaPredicted RBP11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 KLHL28Q9NXS3 571 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 FLRT3Q9NZU0 649 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 ORC6Q9Y5N6 252 aa11.27□□□□□ -0.61
SPTBN1-203ENST00000389980 C2orf92A0A1B0GVN3 265 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 A0A1W2PNU3 283 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 CSO75390 466 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 CCNB2O95067 398 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 KLK3P07288 261 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 THBS1P07996 1170 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 OR1N1Q8NGS0 311 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 OR4C3Q8NH37 302 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC7A13Q8TCU3 470 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 METTL21AQ8WXB1 218 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 GTPBP3Q969Y2 492 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 NMD3Q96D46 503 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 SLX1AQ9BQ83 275 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 AKAP7Q9P0M2 348 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 PISDQ9UG56 409 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 GASTP01350 101 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 HNRNPCP07910 306 aaKnown RBP eCLIP11.26□□□□□ -0.613e-7■■□□□ 13.4
SPTBN1-203ENST00000389980 CCNYL3P0C7X3 344 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 PTNP21246 168 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 PPICP45877 212 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF136P52737 540 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 RAD23AP54725 363 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 TAS2R41P59536 307 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 EBPQ15125 230 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 ENTPD8Q5MY95 495 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 DCST1Q5T197 706 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 C16orf47Q6ZP98 133 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 Q6ZPB1 254 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 USP51Q70EK9 711 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 AQP11Q8NBQ7 271 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 CNOT9Q92600 299 aaKnown RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 LCORQ96JN0 433 aaPredicted RBP11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 DHRS1Q96LJ7 313 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 PRRC1Q96M27 445 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 MCHR1Q99705 422 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 CDC6Q99741 560 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 STRADBQ9C0K7 418 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 POLE3Q9NRF9 147 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 COPS7AQ9UBW8 275 aa11.26□□□□□ -0.61
SPTBN1-203ENST00000389980 SDK2Q58EX2 2172 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 LOC100130705A0A1B0GUX0 176 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 CDHR4A6H8M9 788 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 B4E171 279 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 H0YAE9 185 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 SOX30O94993 753 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 THY1P04216 161 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 TSPAN7P41732 249 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 GPR143P51810 404 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 NR0B1P51843 470 aaKnown RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 E2F1Q01094 437 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 TRIP6Q15654 476 aaKnown RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 NDUFAF6Q330K2 333 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 DCAF12Q5T6F0 453 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 PODNL1Q6PEZ8 512 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 FAM198BQ6UWH4 519 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 MEX3DQ86XN8 651 aaKnown RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 MORN4Q8NDC4 146 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 ADAMTS16Q8TE57 1224 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 THAP3Q8WTV1 239 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 RDH12Q96NR8 316 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 WDR77Q9BQA1 342 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 G6PC3Q9BUM1 346 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC26A1Q9H2B4 701 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 FAIMQ9NVQ4 179 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF223Q9UK11 482 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 TMCC3Q9ULS5 477 aa11.25□□□□□ -0.61
SPTBN1-203ENST00000389980 AP3D1O14617 1153 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 OR10H3O60404 316 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ADAM11O75078 769 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 STK17BO94768 372 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 MT-CO3P00414 261 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms