RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 POMT2Q9UKY4 750 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SLC9A8Q9Y2E8 581 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 SPEGQ15772 3267 aa13.31□□□□□ -0.28
CLCN4-201ENST00000380829 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 FRS3O43559 492 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 FGF17O60258 216 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 FCMRO60667 390 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 UGT2B17O75795 530 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 CPMP14384 443 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 CD27P26842 260 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 TNFSF8P32971 234 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SLC9A3P48764 834 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 NUDT6P53370 316 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 HOXC5Q00444 222 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 MFSD12Q6NUT3 480 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SLC7A13Q8TCU3 470 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 GPR151Q8TDV0 419 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 LMX1AQ8TE12 382 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ADAMTS15Q8TE58 950 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 HLA-CQ95604 372 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 MS4A4EQ96PG1 132 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SPATA5L1Q9BVQ7 753 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 PRR14Q9BWN1 585 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 TIGARQ9NQ88 270 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 FBXL21Q9UKT6 434 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ACAD8Q9UKU7 415 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 GALR3O60755 368 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SOX14O95416 240 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 LGI1O95970 557 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 IGFBP1P08833 259 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ATF4P18848 351 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-201ENST00000380829 CHMP24386 653 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SOX18P35713 384 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ETV6P41212 452 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 PDX1P52945 283 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ESCO2Q56NI9 601 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 MLIPQ5VWP3 458 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 CDS1Q92903 461 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 SEMA6CQ9H3T2 930 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF226Q9NYT6 803 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
CLCN4-201ENST00000380829 A0A1W2PR77 199 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SLC9B1P1A6NJY1 282 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 H3BUI4 141 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 KIAA0513O60268 411 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 RDH16O75452 317 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 UBXN7O94888 489 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SLITRK5O94991 958 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 PPM1FP49593 454 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 RPL6Q02878 288 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 USP53Q70EK8 1073 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 OR2L13Q8N349 312 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ARL14Q8N4G2 192 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 FNDC11Q9BVV2 318 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 HDHD5Q9BXW7 423 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 IMPAD1Q9NX62 359 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 GPR55Q9Y2T6 319 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 FAAHO00519 579 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 CYR61O00622 381 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 TSC22D2O75157 780 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 PTHP01270 115 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ALPPP05187 535 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 NME1P15531 152 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 CRISP1P54107 249 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 TAGLNQ01995 201 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SNTA1Q13424 505 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ELOCQ15369 112 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF79Q15937 498 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 PODNL1Q6PEZ8 512 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 LAX1Q8IWV1 398 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 CA13Q8N1Q1 262 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
CLCN4-201ENST00000380829 OR9A4Q8NGU2 314 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ZNF675Q8TD23 568 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 PINK1Q9BXM7 581 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 RBCK1Q9BYM8 510 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 ADAP2Q9NPF8 381 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 FTSJ1Q9UET6 329 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 PCDHGB2Q9Y5G2 931 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 SPACA6W5XKT8 324 aa13.29□□□□□ -0.28
CLCN4-201ENST00000380829 TLR4O00206 839 aa13.28□□□□□ -0.28
CLCN4-201ENST00000380829 SDC3O75056 442 aa13.28□□□□□ -0.28
CLCN4-201ENST00000380829 OR7A10O76100 309 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms