RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FXYD1O00168 92 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NDUFB5O43674 189 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 UGT2B17O75795 530 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 HPNP05981 417 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 CHRM4P08173 479 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NUDT7P0C024 238 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NPIPA8P0DM63 369 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NR2F1P10589 423 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 HPGDP15428 266 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 CHRNEQ04844 493 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 GPR68Q15743 365 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 FAM91A1Q658Y4 838 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 NANOGP8Q6NSW7 305 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 MTERF4Q7Z6M4 381 aaKnown RBP17.08■□□□□ 0.32
SSU72-203ENST00000378725 ZNF619Q8N2I2 560 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 ZG16BQ96DA0 208 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 CMTM5Q96DZ9 223 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 MTHFD2LQ9H903 347 aaPredicted RBP17.08■□□□□ 0.32
SSU72-203ENST00000378725 NANOGQ9H9S0 305 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 GID8Q9NWU2 228 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 PPP4R1LQ9P1A2 415 aa17.08■□□□□ 0.32
SSU72-203ENST00000378725 MRPS18CQ9Y3D5 142 aaKnown RBP17.08■□□□□ 0.32
SSU72-203ENST00000378725 A0A1B0GVC2 190 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 C17orf51A8MQB3 221 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 CELA3AP09093 270 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 GDF1P27539 372 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 ADH7P40394 386 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 SELPLGQ14242 412 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 GNA13Q14344 377 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 CAPRIN1Q14444 709 aaKnown RBP17.07■□□□□ 0.32
SSU72-203ENST00000378725 CD226Q15762 336 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 ADRM1Q16186 407 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 MAPK14Q16539 360 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 OR5M10Q6IEU7 315 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 ATCAYQ86WG3 371 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 CHERPQ8IWX8 916 aaKnown RBP17.07■□□□□ 0.32
SSU72-203ENST00000378725 GHDCQ8N2G8 530 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 METTL25Q8N6Q8 603 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 CCDC197Q8NCU1 140 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 OR2M3Q8NG83 312 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 OR8J3Q8NGG0 315 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 RCN3Q96D15 328 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 THUMPD3Q9BV44 507 aaKnown RBP17.07■□□□□ 0.32
SSU72-203ENST00000378725 TMEM38AQ9H6F2 299 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 RUBCNLQ9H714 662 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 KAT8Q9H7Z6 458 aaKnown RBP17.07■□□□□ 0.32
SSU72-203ENST00000378725 EFCAB1Q9HAE3 211 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 CALML5Q9NZT1 146 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 SUCOQ9UBS9 1254 aaKnown RBP17.07■□□□□ 0.32
SSU72-203ENST00000378725 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 EML6Q6ZMW3 1958 aa17.07■□□□□ 0.32
SSU72-203ENST00000378725 DSPPQ9NZW4 1301 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 ANKUB1A6NFN9 424 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 SUSD5O60279 629 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 HCN1O60741 890 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 ARAFP10398 606 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 ENDOUP21128 410 aaKnown RBP17.06■□□□□ 0.32
SSU72-203ENST00000378725 MSX1P28360 303 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 CRISP3P54108 245 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 MTPNP58546 118 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 HPCAP84074 193 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 PDZK1Q5T2W1 519 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 GCNT6Q5T4J0 391 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 PRAMEF8Q5VWM4 474 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 PRAMEF7Q5VXH5 474 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 GFRALQ6UXV0 394 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 TRILQ7L0X0 811 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 MAL2Q969L2 176 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 SH3GL1Q99961 368 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 SLC39A3Q9BRY0 314 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 TRIM8Q9BZR9 551 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 DSN1Q9H410 356 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 BCL2L10Q9HD36 194 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 MED11Q9P086 117 aa17.06■□□□□ 0.32
SSU72-203ENST00000378725 A0A0G2JPF8 293 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 CENPVL1A0A0U1RR11 272 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 TMEM247A6NEH6 219 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 SERINC4A6NH21 518 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 AGAP5A6NIR3 686 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 HNRNPCL2B2RXH8 293 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 HNRNPCL3B7ZW38 293 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 H3BNH8 94 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 HNRNPCL1O60812 293 aaKnown RBP17.05■□□□□ 0.32
SSU72-203ENST00000378725 PDE9AO76083 593 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 BCHEP06276 602 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 HNRNPCL4P0DMR1 293 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 RPS4Y1P22090 263 aaKnown RBP17.05■□□□□ 0.32
SSU72-203ENST00000378725 SRD5A2P31213 254 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 GZMMP51124 257 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 HACD2Q6Y1H2 254 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 NET1Q7Z628 596 aaPredicted RBP17.05■□□□□ 0.32
SSU72-203ENST00000378725 SERPINA11Q86U17 422 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 GATSQ8NAP1 163 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 OR4K17Q8NGC6 315 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 PHOSPHO1Q8TCT1 267 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 BCAS4Q8TDM0 211 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 DTNBP1Q96EV8 351 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
SSU72-203ENST00000378725 TREX2Q9BQ50 279 aaPredicted RBP17.05■□□□□ 0.32
SSU72-203ENST00000378725 GPATCH1Q9BRR8 931 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms