RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 GP1BAP07359 652 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 CLCN7P51798 805 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 BOP1Q14137 746 aaKnown RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 BPIFA1Q9NP55 256 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 MCRIP1C9JLW8 97 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 IRAK2O43187 625 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 CKMP06732 381 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NOS3P29474 1203 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 HOXC8P31273 242 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ST8SIA6P61647 398 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NUTF2P61970 127 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 CPSF6Q16630 551 aaKnown RBP eCLIP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 GRHL2Q6ISB3 625 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 DOK6Q6PKX4 331 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 DCXRQ7Z4W1 244 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 RNF141Q8WVD5 230 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ZFP64Q9NPA5 681 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 KCNJ16Q9NPI9 418 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 PLCXD1Q9NUJ7 323 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 DCAF13Q9NV06 445 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NPFFR2Q9Y5X5 522 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 A0A1W2PQH9 124 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 BHLHE40O14503 412 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 SIAH2O43255 324 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 FABP4P15090 132 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 CD68P34810 354 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ACTR1BP42025 376 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 GPR15P49685 360 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ECH1Q13011 328 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 SURF2Q15527 256 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ADCK2Q7Z695 626 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 MYLIPQ8WY64 445 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 GDF15Q99988 308 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 CRTAC1Q9NQ79 661 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 PARPBPQ9NWS1 579 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NDRG4Q9ULP0 352 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 PCDHB10Q9UN67 800 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NOP16Q9Y3C1 178 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 PCDHB1Q9Y5F3 818 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 IGKV6D-21A0A0A0MT36 114 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 LNP1A1A4G5 178 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ART1P52961 327 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 TAP2Q03519 686 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ARHGAP1Q07960 439 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ENPP2Q13822 863 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 GUCA2BQ16661 112 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 LIPJQ5W064 366 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM107Q6UX40 140 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 DDX60Q8IY21 1712 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NANOGP1Q8N7R0 232 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 FOXRED1Q96CU9 486 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 HRASLS5Q96KN8 279 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ADAT1Q9BUB4 502 aaKnown RBP11.1□□□□□ -0.63
NPHP4-202ENST00000378161 MFSD1Q9H3U5 465 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NOX3Q9HBY0 568 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 NUDT4Q9NZJ9 180 aa11.1□□□□□ -0.63
NPHP4-202ENST00000378161 A0A1B0GVC2 190 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 A6NIN4 97 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 YY2O15391 372 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 IGSF6O95976 241 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SLC35E2BP0CK96 405 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 EVX1P49640 407 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 RCAN2Q14206 197 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF630Q2M218 657 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 AARDQ4LEZ3 155 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 CD163Q86VB7 1156 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM159Q96B96 161 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZDHHC4Q9NPG8 344 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MIEF1Q9NQG6 463 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 FAM120CQ9NX05 1096 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 GSKIPQ9P0R6 139 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 C5orf51A6NDU8 294 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 OR4F21O95013 312 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 HLA-DQB2P05538 268 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ACVR2AP27037 513 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MAPK8P45983 427 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 CDC34P49427 236 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TNFRSF9Q07011 255 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TAZQ16635 292 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 FNDC3BQ53EP0 1204 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 IFI44LQ53G44 452 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF385CQ66K41 422 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms