RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 OR2T33Q8NG76 320 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 OR52N1Q8NH53 320 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 LCN9Q8WX39 176 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 SDF2Q99470 211 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 RNF121Q9H920 327 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 RANGRFQ9HD47 186 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 OR6C2Q9NZP2 312 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 ZNF624Q9P2J8 865 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3KA0A087X1G2 549 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 ZC3H12DA2A288 527 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3FA6NER0 549 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 P2RX6O15547 441 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 PLRG1O43660 514 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 CTSVO60911 334 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 FAM157BP0CG42 384 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 SMIM10L1P0DMW3 83 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 HTR2AP28223 471 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 IFNA8P32881 189 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 KIR2DL1P43626 348 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 SEC13P55735 322 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 TNFRSF17Q02223 184 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 ARHGAP11BQ3KRB8 267 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 DEFB134Q4QY38 66 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 TRMT12Q53H54 448 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 TBC1D3GQ6DHY5 549 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 MTSS1LQ765P7 747 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 TRIM48Q8IWZ4 208 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 Q8N402 240 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 CCL4L1Q8NHW4 92 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 SMIM10Q96HG1 83 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 HCAR1Q9BXC0 346 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 MED20Q9H944 212 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 SFXN1Q9H9B4 322 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 C20orf141Q9NUB4 165 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 FBXO34Q9NWN3 711 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 NLGN3Q9NZ94 848 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 KCNE5Q9UJ90 142 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 ZNF223Q9UK11 482 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 FANCMQ8IYD8 2048 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 PRSS38A1L453 326 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 GSAPA4D1B5 854 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 FAM172BPA6NC97 362 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 CENPXA8MT69 81 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 APODP05090 189 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 CA3P07451 260 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 MAKP20794 623 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ADPRHP54922 357 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 DUSP8Q13202 625 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 GPM6BQ13491 265 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 GPR68Q15743 365 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ZNF776Q68DI1 518 aaPredicted RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 PLBD1Q6P4A8 553 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ASPGQ86U10 573 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 OR51G2Q8NGK0 314 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 FAM131CQ96AQ9 280 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 TM4SF19Q96DZ7 209 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 FRMD6Q96NE9 622 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 OR2A5Q96R48 311 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 COQ7Q99807 217 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 KXD1Q9BQD3 176 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 JAM3Q9BX67 310 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 PLSCR3Q9NRY6 295 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 TNFRSF10DQ9UBN6 386 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 TRBV23OR9-2A0A075B6M9 112 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 K7EQS6 105 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 LYPD3O95274 346 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 GKN3PP0CG01 181 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 SLC2A2P11168 524 aaPredicted RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 TBXA2RP21731 343 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 CPN2P22792 545 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 S100A1P23297 94 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 RPS15AP62244 130 aaKnown RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 PPP2CBP62714 309 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 PPP2CAP67775 309 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 TMEM44Q2T9K0 475 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 C6orf183Q5T699 404 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 CXXC5Q7LFL8 322 aaKnown RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 OR4K14Q8NGD5 310 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 PFN4Q8NHR9 129 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ZCCHC10Q8TBK6 192 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 NT5CQ8TCD5 201 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ARSGQ96EG1 525 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 RPP25Q9BUL9 199 aaKnown RBP10.17□□□□□ -0.78
BEST1-201ENST00000378043 DPH1Q9BZG8 443 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 OR52D1Q9H346 318 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 CERS4Q9HA82 394 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ATP13A2Q9NQ11 1180 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 ASB6Q9NWX5 421 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 POLHQ9Y253 713 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 COLEC10Q9Y6Z7 277 aa10.17□□□□□ -0.78
BEST1-201ENST00000378043 BHLHE40O14503 412 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 CHST10O43529 356 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 HCN1O60741 890 aa10.16□□□□□ -0.78
BEST1-201ENST00000378043 ATP6V1E1P36543 226 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms