RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 OTUB1Q96FW1 271 aaPredicted RBP20.05■□□□□ 0.8
SRM-201ENST00000376957 C7orf26Q96N11 449 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 ZFP3Q96NJ6 502 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 OR52E6Q96RD3 313 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 TM9SF2Q99805 663 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 SPOCK3Q9BQ16 436 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 INTS9Q9NV88 658 aaKnown RBP20.05■□□□□ 0.8
SRM-201ENST00000376957 ZNF629Q9UEG4 869 aaPredicted RBP20.05■□□□□ 0.8
SRM-201ENST00000376957 BTNL2Q9UIR0 455 aa20.05■□□□□ 0.8
SRM-201ENST00000376957 ANKRD28O15084 1053 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 UBDO15205 165 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 DIAPH2O60879 1101 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 SLC22A3O75751 556 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 TGDSO95455 350 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 IL6P05231 212 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 PGRP06401 933 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 H2AFXP16104 143 aaPredicted RBP20.04■□□□□ 0.8
SRM-201ENST00000376957 POU3F2P20265 443 aaPredicted RBP20.04■□□□□ 0.8
SRM-201ENST00000376957 PEX19P40855 299 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 NME5P56597 212 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 EEF1A1P68104 462 aaKnown RBP20.04■□□□□ 0.8
SRM-201ENST00000376957 CDSNQ15517 529 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 FLYWCH1Q4VC44 716 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 EXOSC6Q5RKV6 272 aaKnown RBP20.04■□□□□ 0.8
SRM-201ENST00000376957 EEF1A1P5Q5VTE0 462 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 C16orf62Q7Z3J2 963 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 ANKRD46Q86W74 232 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 NUDT8Q8WV74 236 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 MAELQ96JY0 434 aaKnown RBP20.04■□□□□ 0.8
SRM-201ENST00000376957 OR7D2Q96RA2 312 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 PANX1Q96RD7 426 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 ARHGAP21Q5T5U3 1957 aa20.04■□□□□ 0.8
SRM-201ENST00000376957 NKX2-6A6NCS4 301 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 ALDOCP09972 364 aaKnown RBP20.03■□□□□ 0.8
SRM-201ENST00000376957 TCEA1P23193 301 aaKnown RBP20.03■□□□□ 0.8
SRM-201ENST00000376957 DGKQP52824 942 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 WNT3P56703 355 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 UFM1P61960 85 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 PPP2R2AP63151 447 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 TXNL4AP83876 142 aaKnown RBP20.03■□□□□ 0.8
SRM-201ENST00000376957 GDF7Q7Z4P5 450 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 B4GALNT2Q8NHY0 566 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 ZBTB8AQ96BR9 441 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 SH3GL2Q99962 352 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 UCK2Q9BZX2 261 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 GPR45Q9Y5Y3 372 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 USH1CQ9Y6N9 552 aa20.03■□□□□ 0.8
SRM-201ENST00000376957 MBD3L4A6NDZ8 208 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 MBD3L3A6NE82 208 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 MBD3L5A6NJ08 208 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 GTPBP1O00178 669 aaKnown RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 POLR3GO15318 223 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 STX11O75558 287 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 TOXO94900 526 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 SNRPB2P08579 225 aaKnown RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 ZNF708P17019 499 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 CEACAM8P31997 349 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 OPRM1P35372 400 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 ADH7P40394 386 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 STARP49675 285 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 LHX2P50458 406 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 ATP12AP54707 1039 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 RPS3AP61247 264 aaKnown RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 STX1BP61266 288 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 HPCAP84074 193 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 PDCD4Q53EL6 469 aaKnown RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 TTMPQ5BVD1 217 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 DCST1Q5T197 706 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 MEX3BQ6ZN04 569 aaKnown RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 P4HA3Q7Z4N8 544 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 MCEMP1Q8IX19 187 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 MBD3L2Q8NHZ7 208 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 PHOSPHO1Q8TCT1 267 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 WNT2BQ93097 391 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 CCDC115Q96NT0 180 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 SLC35A5Q9BS91 424 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 RMND5AQ9H871 391 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 AP4B1Q9Y6B7 739 aa20.02■□□□□ 0.8
SRM-201ENST00000376957 NUP214P35658 2090 aaPredicted RBP20.02■□□□□ 0.8
SRM-201ENST00000376957 CACNA1CQ13936 2221 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 HCRTR2O43614 444 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 GMFGO60234 142 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 ZNF17P17021 662 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 BMP5P22003 454 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 CTSSP25774 331 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 KHKP50053 298 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 APOOLQ6UXV4 268 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 GRAMD2AQ8IUY3 354 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 ZNF614Q8N883 585 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 GATSQ8NAP1 163 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 TNIP2Q8NFZ5 429 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 OR5D16Q8NGK9 328 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 MIPOL1Q8TD10 442 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 UCN2Q96RP3 112 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 TUBA1CQ9BQE3 449 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 RTN4RQ9BZR6 473 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 ENKD1Q9H0I2 346 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 ZIM2Q9NZV7 527 aa20.01■□□□□ 0.79
SRM-201ENST00000376957 FOXD3Q9UJU5 478 aaPredicted RBP20.01■□□□□ 0.79
SRM-201ENST00000376957 DTNAQ9Y4J8 743 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms