RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 LCTLQ6UWM7 567 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 LIPIQ6XZB0 460 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF620Q6ZNG0 422 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 SRFBP1Q8NEF9 429 aaKnown RBP15.42■□□□□ 0.06
TRIM39-201ENST00000376656 TOR1AIP2Q8NFQ8 470 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 VN1R2Q8NFZ6 395 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 OR4D9Q8NGE8 314 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 RIT1Q92963 219 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 KLHL15Q96M94 604 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 COQ10AQ96MF6 247 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 LINC00052Q96N35 136 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 ZDHHC5Q9C0B5 715 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF436Q9C0F3 470 aaPredicted RBP15.42■□□□□ 0.06
TRIM39-201ENST00000376656 TMEM168Q9H0V1 697 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 RHBGQ9H310 441 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 LIN7BQ9HAP6 207 aa15.42■□□□□ 0.06
TRIM39-201ENST00000376656 LYARQ9NX58 379 aaKnown RBP15.42■□□□□ 0.06
TRIM39-201ENST00000376656 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-201ENST00000376656 NEDD8-MDP1E9PL57 170 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 LEFTY2O00292 366 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 KHNYNO15037 678 aaKnown RBP15.41■□□□□ 0.06
TRIM39-201ENST00000376656 FPR3P25089 353 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 STAT5AP42229 794 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 PRKCZQ05513 592 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF750Q32MQ0 723 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF697Q5TEC3 545 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 BTN2A1Q7KYR7 527 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 UBE3DQ7Z6J8 389 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 NUDT13Q86X67 352 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 IFNL1Q8IU54 200 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 OR51Q1Q8NH59 317 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 CYB5D2Q8WUJ1 264 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 CAMK1GQ96NX5 476 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 JAM3Q9BX67 310 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 POLMQ9NP87 494 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-201ENST00000376656 ASF1AQ9Y294 204 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 KIAA0355O15063 1070 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 PEPDP12955 493 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 PSMB5P28074 263 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 LCN1P31025 176 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 ST3GAL3Q11203 375 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 BTN1A1Q13410 526 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 GARNL3Q5VVW2 1013 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 CDC73Q6P1J9 531 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 PRSS45Q7RTY3 260 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 OR2T4Q8NH00 348 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 DPH7Q9BTV6 452 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 TEX12Q9BXU0 123 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 MED17Q9NVC6 651 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 OR6C2Q9NZP2 312 aa15.41■□□□□ 0.06
TRIM39-201ENST00000376656 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
TRIM39-201ENST00000376656 CDC42EP2O14613 210 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 SLC9A3R1O14745 358 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 THY1P04216 161 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 SNRPBP14678 240 aaKnown RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 SELPP16109 830 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 PAICSP22234 425 aaKnown RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 KELP23276 732 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 F8A1P23610 371 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 DPPA4Q7L190 304 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 FGD2Q7Z6J4 655 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 C17orf64Q86WR6 236 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 C17orf47Q8NEP4 570 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 RPLP0P6Q8NHW5 317 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 TMEM255BQ8WV15 326 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 THAP4Q8WY91 577 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 COPZ2Q9P299 210 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 FLVCR2Q9UPI3 526 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ENTPD4Q9Y227 616 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 RWDD3Q9Y3V2 267 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 GOLGA4Q13439 2230 aaKnown RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 KIAA1549LQ6ZVL6 1849 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 A0A0G2JPF8 293 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 HNRNPCL2B2RXH8 293 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 HNRNPCL3B7ZW38 293 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 HNRNPCL4P0DMR1 293 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ACADLP28330 430 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 GCGRP47871 477 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 SYT9Q86SS6 491 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 RNF180Q86T96 592 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF547Q8IVP9 402 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 OR2T33Q8NG76 320 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ABHD4Q8TB40 342 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 AHCYL2Q96HN2 611 aaKnown RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 DDOQ99489 341 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ARHGDIGQ99819 225 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 HCAR1Q9BXC0 346 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 TRIM36Q9NQ86 728 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 PRKAB1Q9Y478 270 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 H7BY64 318 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 NDUFS4O43181 175 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 REM1O75628 298 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 MMP15P51511 669 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 ZNF157P51786 506 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 GBX2P52951 348 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-201ENST00000376656 BLVRAP53004 296 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 GNA13Q14344 377 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 NDUFAF5Q5TEU4 345 aa15.4■□□□□ 0.06
TRIM39-201ENST00000376656 TMEM215Q68D42 235 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms