RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NTMQ9P121 344 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 EMCNQ9ULC0 261 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 MED12LQ86YW9 2145 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 A0A1W2PQD3 144 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 GJE1A6NN92 205 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 DEFB108AA8MXU0 73 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 EIF1AYO14602 144 aaKnown RBP13.26□□□□□ -0.29
HDAC6-204ENST00000376643 CGAP01215 116 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 ALOX5P09917 674 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 IL11P20809 199 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 HPCAL1P37235 193 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 SUCLG1P53597 346 aaKnown RBP13.26□□□□□ -0.29
HDAC6-204ENST00000376643 CLDN20P56880 219 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 RAC1P63000 192 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 KIAA0040Q15053 153 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 TMEM44Q2T9K0 475 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 PPP4R4Q6NUP7 873 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 PLXDC2Q6UX71 529 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 CLEC9AQ6UXN8 241 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 BEND4Q6ZU67 534 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF551Q7Z340 670 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-204ENST00000376643 CXorf67Q86X51 503 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-204ENST00000376643 COX18Q8N8Q8 333 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 SLC9A6Q92581 669 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 REXO5Q96IC2 774 aaKnown RBP13.26□□□□□ -0.29
HDAC6-204ENST00000376643 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 ABCA2Q9BZC7 2435 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 UBTD1Q9HAC8 227 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 SH3BP4Q9P0V3 963 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 VDAC3Q9Y277 283 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 SNX8Q9Y5X2 465 aa13.26□□□□□ -0.29
HDAC6-204ENST00000376643 A0A1W2PPM1 405 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 H3BNH8 94 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 TRIM13O60858 407 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 OXSR1O95747 527 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ATP6V1C1P21283 382 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ELK4P28324 431 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 FRKP42685 505 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 PRKAG1P54619 331 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 RPL38P63173 70 aaKnown RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 LTBQ06643 244 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 MLC1Q15049 377 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 GUSBP1Q15486 140 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 CPTPQ5TA50 214 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF610Q8N9Z0 462 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 UBLCP1Q8WVY7 318 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 FCRL1Q96LA6 429 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 PPP3R2Q96LZ3 170 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 STACQ99469 402 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 TACO1Q9BSH4 297 aaKnown RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 KLHL4Q9C0H6 718 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 HOXD1Q9GZZ0 328 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 CXorf56Q9H5V9 222 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 DUSP22Q9NRW4 184 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ATAD3AQ9NVI7 634 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 GIN1Q9NXP7 522 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 FLRT3Q9NZU0 649 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 CCL27Q9Y4X3 112 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 ACANP16112 2415 aa13.25□□□□□ -0.29
HDAC6-204ENST00000376643 FLNAP21333 2647 aaKnown RBP13.25□□□□□ -0.29
HDAC6-204ENST00000376643 GXYLT2A0PJZ3 443 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 B4DXG7 233 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 HEXAP06865 529 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 TUBBP07437 444 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 SDC1P18827 310 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 KRT4P19013 534 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 MAP3K8P41279 467 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 SUMO3P55854 103 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-204ENST00000376643 PDE7AQ13946 482 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 RNPS1Q15287 305 aaKnown RBP13.24□□□□□ -0.29
HDAC6-204ENST00000376643 CLEC6AQ6EIG7 209 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 BHLHB9Q6PI77 547 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 SH2D5Q6ZV89 423 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 GGNQ86UU5 652 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 RIBC1Q8N443 379 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-204ENST00000376643 OR5M1Q8NGP8 315 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 OR10D3Q8NH80 312 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 OR2V1Q8NHB1 315 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 B4GALNT2Q8NHY0 566 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 PIK3R3Q92569 461 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 JADE3Q92613 823 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 EGLN2Q96KS0 407 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 PRPF18Q99633 342 aaKnown RBP13.24□□□□□ -0.29
HDAC6-204ENST00000376643 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 HDHD5Q9BXW7 423 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 GSX1Q9H4S2 264 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-204ENST00000376643 GP6Q9HCN6 339 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 NGBQ9NPG2 151 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 MKS1Q9NXB0 559 aa13.24□□□□□ -0.29
HDAC6-204ENST00000376643 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms