RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 C6P13671 934 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 FUT1P19526 365 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 IFNGR2P38484 337 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 BTG1P62324 171 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 NTRK2Q16620 822 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 TEX261Q6UWH6 196 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SFTPA1Q8IWL2 248 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 OR4N4Q8N0Y3 316 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF680Q8NEM1 530 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 OR52N1Q8NH53 320 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SMAP2Q8WU79 429 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SAMD8Q96LT4 415 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 GPR137Q96N19 417 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 OSGEPL1Q9H4B0 414 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 UCKL1Q9NWZ5 548 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 ING4Q9UNL4 249 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 U3KQ87 197 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 E9PI62 339 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 CDC42EP2O14613 210 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 FCMRO60667 390 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 RGS9O75916 674 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 AHCYP23526 432 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 HTR1FP30939 366 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 BMP8BP34820 402 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 FAM46CQ5VWP2 391 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 PLBD1Q6P4A8 553 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 DCUN1D3Q8IWE4 304 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 OSTF1Q92882 214 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 TIMP4Q99727 224 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 RPP25Q9BUL9 199 aaKnown RBP13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 PLA2G2FQ9BZM2 168 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC38A1Q9H2H9 487 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 GHITMQ9H3K2 345 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 ELF5Q9UKW6 265 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 CACNG2Q9Y698 323 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 C17orf113A0A1B0GUU1 675 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 CIB4A0PJX0 185 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 C4orf51C9J302 202 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 THBS2P35442 1172 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 NUDT1P36639 197 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 TALDO1P37837 337 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 REEP5Q00765 189 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 MLC1Q15049 377 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 POU4F3Q15319 338 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 BEST4Q8NFU0 473 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 OR8K5Q8NH50 307 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 PIGUQ9H490 435 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 NT5DC2Q9H857 520 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 IL20Q9NYY1 176 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 GLTPQ9NZD2 209 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 ATG4BQ9Y4P1 393 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 ASB4Q9Y574 426 aa13.17□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A1W2PPV9 198 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 POU2F2P09086 479 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CD3GP09693 182 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF250P15622 560 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CFL1P23528 166 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 SSTR2P30874 369 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 PITPNBP48739 271 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 HBMQ6B0K9 141 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ARL9Q6T311 187 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 LINC01555Q8NAE3 123 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ACOT12Q8WYK0 555 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 LINC00615Q96LM1 132 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CAMK1GQ96NX5 476 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 MYADMQ96S97 322 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CDCA3Q99618 268 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 WASH6PQ9NQA3 447 aa13.16□□□□□ -0.3
CLCNKA-202ENST00000375692 BABAM2Q9NXR7 383 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms