RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 NRTNQ99748 197 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 MKRN2Q9H000 416 aaKnown RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 ADAM29Q9UKF5 820 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 PPIEQ9UNP9 301 aaKnown RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 TMEM5Q9Y2B1 443 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 H3BSH0 61 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 TSPAN4O14817 238 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 AKR7A2O43488 359 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 SLC43A1O75387 559 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 NUDT14O95848 222 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 CEBPBP17676 345 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 GIFP27352 417 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 OMPP47874 163 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 LBX1P52954 281 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 CLDN2P57739 230 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 FCN2Q15485 313 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 ZNF79Q15937 498 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 CCDC58Q4VC31 144 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 MSANTD3Q96H12 275 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 KLHL31Q9H511 634 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 NIPAL2Q9H841 368 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 RDH8Q9NYR8 311 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 RNF13O43567 381 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 SLC2A10O95528 541 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 FCER2P06734 321 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 HLA-DMAP28067 261 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 SLC6A6P31641 620 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 GABRA3P34903 492 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 TSPAN5P62079 268 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 HSF2Q03933 536 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 PUS10Q3MIT2 529 aaKnown RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 ACSM3Q53FZ2 586 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 C2orf27AQ580R0 203 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 KIAA1324Q6UXG2 1013 aaKnown RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 UBE2Q1Q7Z7E8 422 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 ASPGQ86U10 573 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
CUL4A-203ENST00000375441 USP36Q9P275 1121 aaKnown RBP12.31□□□□□ -0.44
CUL4A-203ENST00000375441 CCDC88CQ9P219 2028 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 GREM1O60565 184 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ATP5A1P25705 553 aaKnown RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 LCN1P31025 176 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 EVX1P49640 407 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 SLC25A25Q6KCM7 469 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ZNF765Q7L2R6 523 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 CHMP1BQ7LBR1 199 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ADGRF3Q8IZF5 1079 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 RBM18Q96H35 190 aaKnown RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 C4orf36Q96KX1 117 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TTYH1Q9H313 450 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 OR51J1Q9H342 316 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 MKKSQ9NPJ1 570 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 HEBP2Q9Y5Z4 205 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ZNF879B4DU55 563 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 H0YC42 278 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 PAHP00439 452 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 PXNP49023 591 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 GZMKP49863 264 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ERVFC1P60507 584 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TRAM1Q15629 374 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 FLYWCH1Q4VC44 716 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TP53I3Q53FA7 332 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TMC8Q8IU68 726 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TMIEQ8NEW7 156 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 BBS1Q8NFJ9 593 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 UCN3Q969E3 161 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 SLC22A18Q96BI1 424 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 SIGLEC11Q96RL6 698 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 BTBD2Q9BX70 525 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 C1QTNF2Q9BXJ5 285 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 NT5DC2Q9H857 520 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 FZD3Q9NPG1 666 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TRBV2A0A0J9YWF9 115 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 OR6A2O95222 327 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 PPP1R3DO95685 299 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 ELK1P19419 428 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 HYAL2Q12891 473 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 TMEM201Q5SNT2 666 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 MEPCEQ7L2J0 689 aaKnown RBP12.3□□□□□ -0.44
CUL4A-203ENST00000375441 JAZF1Q86VZ6 243 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 FAM109AQ8N4B1 249 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 MS4A15Q8N5U1 240 aa12.3□□□□□ -0.44
CUL4A-203ENST00000375441 AMER3Q8N944 861 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms