RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PIGXQ8TBF5 258 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 BBS4Q96RK4 519 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 GAS2L1Q99501 681 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 AIF1LQ9BQI0 150 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PLA2G2FQ9BZM2 168 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 GHITMQ9H3K2 345 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 EMC7Q9NPA0 242 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SEMA4GQ9NTN9 838 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 CHD7Q9P2D1 2997 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 H7BY64 318 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 KPNA3O00505 521 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 CD3GP09693 182 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 NAT1P18440 290 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PAICSP22234 425 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 GIFP27352 417 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PSMB5P28074 263 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 BTCP35070 178 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 KHKP50053 298 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SNTA1Q13424 505 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 RASSF6Q6ZTQ3 369 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 C16orf62Q7Z3J2 963 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 CPOQ8IVL8 374 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 OR52N1Q8NH53 320 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SCMH1Q96GD3 660 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PRAP1Q96NZ9 151 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ABHD1Q96SE0 405 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 EQTNQ9NQ60 294 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SLCO1C1Q9NYB5 712 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 MRPL39Q9NYK5 338 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 NTNG1Q9Y2I2 539 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SIRT4Q9Y6E7 314 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SURF4O15260 269 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TOXO94900 526 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TCRBP04435 133 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 MTNR1BP49286 362 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TRAM2Q15035 370 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF311Q5JNZ3 666 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SMARCD3Q6STE5 483 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PARM1Q6UWI2 310 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SUN3Q8TAQ9 357 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SETD7Q8WTS6 366 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ZFPM2Q8WW38 1151 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 LRIG1Q96JA1 1093 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ZFP3Q96NJ6 502 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ARPC5LQ9BPX5 153 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TRMT61BQ9BVS5 477 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SYNDIG1Q9H7V2 258 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 COLQQ9Y215 455 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 GPR55Q9Y2T6 319 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 NUMA1Q14980 2115 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 COL4A3Q01955 1670 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 C7orf66A4D0T2 115 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CDK2AP1O14519 115 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 HMGN2P05204 90 aaKnown RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 PTGS2P35354 604 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 FUT5Q11128 374 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 HTR4Q13639 388 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 EXOSC2Q13868 293 aaKnown RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 DPPA4Q7L190 304 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 MRGPREQ86SM8 312 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 OAFQ86UD1 273 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 VRK2Q86Y07 508 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 NKAIN4Q8IVV8 208 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 NRMQ8IXM6 262 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 TOMM5Q8N4H5 51 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CEP76Q8TAP6 659 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 HSD17B8Q92506 261 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 OSTF1Q92882 214 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 RAD51AP1Q96B01 352 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZG16BQ96DA0 208 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 AMDHD1Q96NU7 426 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZCCHC2Q9C0B9 1178 aaKnown RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 LHX9Q9NQ69 397 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 HINT3Q9NQE9 182 aaKnown RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 IL36AQ9UHA7 158 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 LIPT1Q9Y234 373 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 KCNE3Q9Y6H6 103 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 A8MUA0 341 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 NDUFS4O43181 175 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 OR1F1O43749 312 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 SSNA1O43805 119 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 RBMS1P29558 406 aaKnown RBP10.35□□□□□ -0.75
CCDC40-203ENST00000374877 AHRP35869 848 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 SSR2P43308 183 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 GPR1P46091 355 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CCR6P51684 374 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZSWIM7Q19AV6 140 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF750Q32MQ0 723 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ITPRIPL2Q3MIP1 535 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF805Q5CZA5 627 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 NDUFAF5Q5TEU4 345 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 CDC73Q6P1J9 531 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 LCTLQ6UWM7 567 aa10.35□□□□□ -0.75
CCDC40-203ENST00000374877 TRMT10AQ8TBZ6 339 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms