RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SLC16A11Q8NCK7 471 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 PSMA8Q8TAA3 256 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 AGR3Q8TD06 166 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 FAM120BQ96EK7 910 aaKnown RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 CHMP6Q96FZ7 201 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 BHLHE41Q9C0J9 482 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 PIGUQ9H490 435 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 GALNT8Q9NY28 637 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 ELOVL5Q9NYP7 299 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 NOP53Q9NZM5 478 aaKnown RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 ST6GALNAC2Q9UJ37 374 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 SNX8Q9Y5X2 465 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 CSMD2Q7Z408 3487 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 DCHS2Q6V1P9 2916 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 C7orf72A4D263 438 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 TNFSF13O75888 250 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 HMGN2P05204 90 aaKnown RBP17.04■□□□□ 0.32
TMEM53-201ENST00000372235 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 TCEA1P23193 301 aaKnown RBP17.04■□□□□ 0.32
TMEM53-201ENST00000372235 ME2P23368 584 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 EIF1P41567 113 aaKnown RBP17.04■□□□□ 0.32
TMEM53-201ENST00000372235 ETV4P43268 484 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 CCT3P49368 545 aaKnown RBP17.04■□□□□ 0.32
TMEM53-201ENST00000372235 C21orf58P58505 322 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 SNTB1Q13884 538 aaKnown RBP17.04■□□□□ 0.32
TMEM53-201ENST00000372235 SPDYE7PQ495Y7 208 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 IL23RQ5VWK5 629 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 CDC73Q6P1J9 531 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 LRRC34Q8IZ02 419 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 SFXN5Q8TD22 340 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 ADAMTS15Q8TE58 950 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 COQ8BQ96D53 544 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 PINK1Q9BXM7 581 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 ACTRT3Q9BYD9 372 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 FLRT3Q9NZU0 649 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 ZDHHC2Q9UIJ5 367 aa17.04■□□□□ 0.32
TMEM53-201ENST00000372235 DOCK7Q96N67 2140 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 UQCRHLA0A096LP55 91 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 DUXAA6NLW8 204 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 SEC14L5O43304 696 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 TGM6O95932 706 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 IGKV1D-16P01601 117 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 SERPINE1P05121 402 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 ACP2P11117 423 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 IST1P53990 364 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 EMX2Q04743 252 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 DUSP5Q16690 384 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 TMEM44Q2T9K0 475 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 GTF2IRD2BQ6EKJ0 949 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 FIGNL1Q6PIW4 674 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 GTF2IRD2Q86UP8 949 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 EXOC3L1Q86VI1 746 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 GTPBP8Q8N3Z3 284 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-201ENST00000372235 CNEP1R1Q8N9A8 125 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 OR7A2PQ8NGA2 310 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 OR4C3Q8NH37 302 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 PRRG4Q9BZD6 226 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 RNF122Q9H9V4 155 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 GLRX2Q9NS18 164 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 ASIC5Q9NY37 505 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF226Q9NYT6 803 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 MCTS1Q9ULC4 181 aaKnown RBP17.03■□□□□ 0.32
TMEM53-201ENST00000372235 ACTL7BQ9Y614 415 aa17.03■□□□□ 0.32
TMEM53-201ENST00000372235 OTOGQ6ZRI0 2925 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 SH3D21A4FU49 640 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 B4DXG7 233 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 SKAP2O75563 359 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 AK1P00568 194 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 CD8BP10966 210 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 LAMP1P11279 417 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 RIPPLY3P57055 190 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 RAC1P63000 192 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 LASP1Q14847 261 aaKnown RBP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 PTGR1Q14914 329 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 PON3Q15166 354 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 EXOSC6Q5RKV6 272 aaKnown RBP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 APOOLQ6UXV4 268 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 VPS37AQ8NEZ2 397 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 B4GALNT2Q8NHY0 566 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 LINC01560Q8TB33 94 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 PGM2Q96G03 612 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF845Q96IR2 970 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 C1orf50Q9BV19 199 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 DUSP26Q9BV47 211 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 RTN4RQ9BZR6 473 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 CXXC4Q9H2H0 198 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 SIRT3Q9NTG7 399 aaPredicted RBP17.02■□□□□ 0.32
TMEM53-201ENST00000372235 PCDHGB4Q9UN71 923 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 VDAC3Q9Y277 283 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 EMC9Q9Y3B6 208 aa17.02■□□□□ 0.32
TMEM53-201ENST00000372235 GJE1A6NN92 205 aa17.01■□□□□ 0.31
TMEM53-201ENST00000372235 CFLARO15519 480 aa17.01■□□□□ 0.31
TMEM53-201ENST00000372235 ZNF500O60304 480 aaPredicted RBP17.01■□□□□ 0.31
TMEM53-201ENST00000372235 PABPC4LP0CB38 370 aaKnown RBP17.01■□□□□ 0.31
TMEM53-201ENST00000372235 ADH6P28332 368 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms