RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 TWIST2Q8WVJ9 160 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 AP3S1Q92572 193 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FAM162AQ96A26 154 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 SMIM14Q96QK8 99 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ATOH8Q96SQ7 321 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ENKD1Q9H0I2 346 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 METTL9Q9H1A3 318 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 PISDQ9UG56 409 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 IKZF3Q9UKT9 509 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 NEUROG3Q9Y4Z2 214 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 RAI2Q9Y5P3 530 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 CHD5Q8TDI0 1954 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ANKRD66B4E2M5 251 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 DISC1C4P0D8 188 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 E9PI62 339 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 GPR31O00270 319 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 CXCR6O00574 342 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TXNL1O43396 289 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 NDUFS3O75489 264 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SLC22A3O75751 556 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 CDRT1O95170 752 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SIX3O95343 332 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SIX6O95475 246 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 IFNA10P01566 189 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 THBDP07204 575 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 POU2F2P09086 479 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PSMA1P25786 263 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 HTR5AP47898 357 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 DIO3P55073 304 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ARF5P84085 180 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 DOC2BQ14184 412 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SLBPQ14493 270 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 HLXQ14774 488 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF57Q68EA5 555 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PAQR3Q6TCH7 311 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF852Q6ZMS4 543 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 NAA40Q86UY6 237 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SLC44A3Q8N4M1 653 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 NUDT8Q8WV74 236 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 KAT2AQ92830 837 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 EXT2Q93063 718 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 MTFMTQ96DP5 389 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ELMOD3Q96FG2 381 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TSNAXQ99598 290 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 INPP5KQ9BT40 448 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ADGRE3Q9BY15 652 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TMPRSS13Q9BYE2 586 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 AMBNQ9NP70 447 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TAS2R16Q9NYV7 291 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TAS2R13Q9NYV9 303 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 DHCR7Q9UBM7 475 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 YIPF1Q9Y548 306 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ASB1Q9Y576 335 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 NUBP2Q9Y5Y2 271 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TRBV23OR9-2A0A075B6M9 112 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 KERAO60938 352 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ICOSLGO75144 302 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 CRTAPO75718 401 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 VIPP01282 170 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 HCKP08631 526 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 GABRA1P14867 456 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM11P17152 192 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PDHA2P29803 388 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 BTCP35070 178 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PPM1AP35813 382 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 GRK6P43250 576 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ZP1P60852 638 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 UBXN2BQ14CS0 331 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ATP13A5Q4VNC0 1218 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 OR2T5Q6IEZ7 315 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 LINGO4Q6UY18 593 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 NPSR1Q6W5P4 371 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 ZFAND4Q86XD8 727 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PIANPQ8IYJ0 282 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 OR10H5Q8NGA6 315 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 OR2T29Q8NH02 315 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 STAG3L4Q8TBR4 150 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM163Q8TC26 289 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TCTEX1D2Q8WW35 142 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TCEAL4Q96EI5 215 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PPM1MQ96MI6 270 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SERINC2Q96SA4 455 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 HBEGFQ99075 208 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 GGACTQ9BVM4 153 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 SPATA5L1Q9BVQ7 753 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 TUBB1Q9H4B7 451 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 UNKLQ9H9P5 680 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 CNOT2Q9NZN8 540 aaKnown RBP8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PLEKHA6Q9Y2H5 1048 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 PTGDR2Q9Y5Y4 395 aa8.29□□□□□ -1.08
ATG4A-203ENST00000372232 LRRC14BA6NHZ5 514 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 RFPL4AA6NLU0 287 aa8.28□□□□□ -1.08
ATG4A-203ENST00000372232 MCRIP1C9JLW8 97 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms