RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NCF4Q15080 339 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 ENTPD8Q5MY95 495 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 PAPD4Q6PIY7 484 aaKnown RBP24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 DHRS13Q6UX07 377 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 CMIPQ8IY22 773 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 NFAM1Q8NET5 270 aaPredicted RBP24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 SLC7A13Q8TCU3 470 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 ANKRD19PQ9H560 264 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 PAPOLBQ9NRJ5 636 aaKnown RBP24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 LOC100130705A0A1B0GUX0 176 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 PLD2O14939 933 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 LCN1P31025 176 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 PLEKHM3Q6ZWE6 761 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 TSPYL5Q86VY4 417 aaPredicted RBP24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 OR9Q2Q8NGE9 314 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 DIO2Q92813 273 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 SLC35B4Q969S0 331 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 HSPBAP1Q96EW2 488 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 FUZQ9BT04 418 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 RIBC2Q9H4K1 309 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 PCDHGB5Q9Y5G0 923 aa24.27■■□□□ 1.48
ATPAF1-202ENST00000371937 CPSF4LA6NMK7 179 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 FMO6PO60774 539 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 CYP7B1O75881 506 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 OR5F1O95221 314 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 CLIC3O95833 236 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF136P52737 540 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 FGFBP1Q14512 234 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TRAM2Q15035 370 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF770Q6IQ21 691 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 HSDL2Q6YN16 418 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF527Q8NB42 609 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 AQP11Q8NBQ7 271 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 ADAMTS16Q8TE57 1224 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 EFHD2Q96C19 240 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 PRR14Q9BWN1 585 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 CTPS2Q9NRF8 586 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 UBQLN4Q9NRR5 601 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 MAN2C1Q9NTJ4 1040 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 ENOPH1Q9UHY7 261 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 SH3PXD2BA1X283 911 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 PRKNO60260 465 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TNFAIP8O95379 198 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 CBLP22681 906 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 KRT20P35900 424 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 RPS6KA3P51812 740 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 NR0B1P51843 470 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 CLDN6P56747 220 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 RNF4P78317 190 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 HOXC5Q00444 222 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 IL18R1Q13478 541 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 APCDD1LQ8NCL9 501 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TOR1AIP2Q8NFQ8 470 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 OR4C3Q8NH37 302 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 SLC38A4Q969I6 547 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TP53INP1Q96A56 240 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 VMP1Q96GC9 406 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 MUS81Q96NY9 551 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 WDR77Q9BQA1 342 aaPredicted RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TESQ9UGI8 421 aaKnown RBP24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 SCOCQ9UIL1 159 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 PADI1Q9ULC6 663 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 MGAT4BQ9UQ53 548 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 PCDHGA3Q9Y5H0 932 aa24.26■■□□□ 1.47
ATPAF1-202ENST00000371937 TEX51A0A1B0GUA7 166 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 OR10H3O60404 316 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 SEC23BQ15437 767 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 HES3Q5TGS1 186 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 TMEM164Q5U3C3 297 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 PODNL1Q6PEZ8 512 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 C6orf15Q6UXA7 325 aaPredicted RBP24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 C8orf59Q8N0T1 100 aaPredicted RBP24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF441Q8N8Z8 693 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 LMF1Q96S06 567 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 GABARAPL3Q9BY60 117 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 GRIP2Q9C0E4 1043 aa24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 PTRH2Q9Y3E5 179 aaKnown RBP24.25■■□□□ 1.47
ATPAF1-202ENST00000371937 ADAP00813 363 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 HPGDP15428 266 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 MYBPC1Q00872 1141 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 NPRL3Q12980 569 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 SLCO6A1Q86UG4 719 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 OR2Y1Q8NGV0 311 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 NIPSNAP1Q9BPW8 284 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 NRSN2Q9GZP1 204 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 SERINC4A6NH21 518 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 KLF7O75840 302 aaPredicted RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 SEC24DO94855 1032 aaPredicted RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 GASTP01350 101 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 GKN3PP0CG01 181 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 IL12BP29460 328 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 POLR2IP36954 125 aaKnown RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 TPD52P55327 224 aaPredicted RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 KEAP1Q14145 624 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 SLC34A3Q8N130 599 aa24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 WDR36Q8NI36 951 aaKnown RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 CNOT9Q92600 299 aaKnown RBP24.24■■□□□ 1.47
ATPAF1-202ENST00000371937 LOC102723996A0A087X1L8 192 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 PCNX2A6NKB5 2137 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 BCKDKO14874 412 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms