RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SSR3Q9UNL2 185 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 WDFY3Q8IZQ1 3526 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 TICRRQ7Z2Z1 1910 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 SH3D21A4FU49 640 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 CD8B2A6NJW9 211 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 H3BSH0 61 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 DVL2O14641 736 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 MED26O95402 600 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 CD8BP10966 210 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 SDC2P34741 201 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 RUNX1T1Q06455 604 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 CADM3Q8N126 398 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 SIX5Q8N196 739 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 TM9SF4Q92544 642 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 CNOT9Q92600 299 aaKnown RBP10.94□□□□□ -0.66
PDE6C-201ENST00000371447 TRNT1Q96Q11 434 aaKnown RBP10.94□□□□□ -0.66
PDE6C-201ENST00000371447 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 MMP27Q9H306 513 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 ZSCAN32Q9NX65 697 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 KCNE5Q9UJ90 142 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 FBXL4Q9UKA2 621 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 OR10H1Q9Y4A9 318 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 ZDBF2Q9HCK1 2354 aa10.94□□□□□ -0.66
PDE6C-201ENST00000371447 DUXAA6NLW8 204 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 CHST10O43529 356 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 TBX19O60806 448 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 SOX30O94993 753 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 APBB3O95704 486 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 PPP5CP53041 499 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 KIAA1024LP59773 190 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 EIF2B5Q13144 721 aaKnown RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 MINDY4Q4G0A6 757 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 FBXO43Q4G163 708 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 FLYWCH1Q4VC44 716 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 C12orf73Q69YU5 71 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 C1orf94Q6P1W5 598 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 TMEM64Q6YI46 380 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 WDR88Q6ZMY6 472 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 ATCAYQ86WG3 371 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 PHC2Q8IXK0 858 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 OR10H4Q8NGA5 316 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 MMABQ96EY8 250 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 KLHDC7BQ96G42 594 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 SPACA7Q96KW9 195 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 NELL2Q99435 816 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 TRIM45Q9H8W5 580 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 MTHFD2LQ9H903 347 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 ANKHQ9HCJ1 492 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 BCL2L10Q9HD36 194 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 FKBP14Q9NWM8 211 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 SLC22A7Q9Y694 548 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 A8MV72 311 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 HRO43593 1189 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 UBXN7O94888 489 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 ZNF10P21506 573 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 IFNGR2P38484 337 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 HCCSP53701 268 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 GFERP55789 205 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 KLBQ86Z14 1044 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 FLVCR1-AS1Q8TAF5 88 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 DIO2Q92813 273 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 VMP1Q96GC9 406 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 GSDMCQ9BYG8 508 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 SLC25A19Q9HC21 320 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 WSB2Q9NYS7 404 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 LIPT1Q9Y234 373 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 DTX4Q9Y2E6 619 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 PCDHGA3Q9Y5H0 932 aa10.93□□□□□ -0.66
PDE6C-201ENST00000371447 NUP210Q8TEM1 1887 aaPredicted RBP10.93□□□□□ -0.66
PDE6C-201ENST00000371447 CDC14CA4D256 554 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 STX11O75558 287 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 RAB36O95755 333 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 LALBAP00709 142 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TNFSF8P32971 234 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 MLC1Q15049 377 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 NCF4Q15080 339 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 PLEKHG7Q6ZR37 379 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 SHISA6Q6ZSJ9 500 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 GNPDA2Q8TDQ7 276 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 LMF1Q96S06 567 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 DCLRE1CQ96SD1 692 aaKnown RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 SLC38A3Q99624 504 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 HCAR1Q9BXC0 346 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 BARHL1Q9BZE3 327 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 FAM171A2A8MVW0 826 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 MAKP20794 623 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 HTR2AP28223 471 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TPTEP56180 551 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TUBA1BP68363 451 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 FZD2Q14332 565 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 IRF3Q14653 427 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 OXA1LQ15070 435 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 OR1Q1Q15612 314 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TUBA1AQ71U36 451 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 C10orf53Q8N6V4 93 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TSTD1Q8NFU3 115 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms