RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MYF5P13349 255 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SOX6P35712 828 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TGFBR1P36897 503 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CEACAM6P40199 344 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MAP2K4P45985 399 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TAS2R60P59551 318 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RNF4P78317 190 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 HSF2Q03933 536 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ARHGEF7Q14155 803 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 NCF4Q15080 339 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 NR0B2Q15466 257 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CLEC6AQ6EIG7 209 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SCIMPQ6UWF3 145 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 GDPGP1Q6ZNW5 385 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 DPH7Q9BTV6 452 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TAPBPLQ9BX59 468 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MIXL1Q9H2W2 232 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 UNKLQ9H9P5 680 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RNF122Q9H9V4 155 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 EML4Q9HC35 981 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 KLHL1Q9NR64 748 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SLCO1C1Q9NYB5 712 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 C3orf18Q9UK00 162 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MAB21L2Q9Y586 359 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 KCNE1BA0A087WTH5 132 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 SGK494L7N484 410 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ATXN7O15265 892 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CHP2O43745 196 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 OR1I1O60431 355 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ERN1O75460 977 aaKnown RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 TIAF1O95411 115 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ANGPTL1O95841 491 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 OR56A5P0C7T3 313 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 F3P13726 295 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 GADD45AP24522 165 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 GPC1P35052 558 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CAPZBP47756 277 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 C21orf58P58505 322 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 E2F1Q01094 437 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CHRNA6Q15825 494 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 RPE65Q16518 533 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 UGT3A2Q3SY77 523 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 HES3Q5TGS1 186 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 B3GNTL1Q67FW5 361 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 LCN10Q6JVE6 187 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM71Q6P5X7 295 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PAQR3Q6TCH7 311 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.382e-7■■■□□ 15.4
CSDE1-204ENST00000369530 PGAP1Q75T13 922 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 DET1Q7L5Y6 550 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 MS4A15Q8N5U1 240 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CLDN19Q8N6F1 224 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ZSCAN1Q8NBB4 408 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 SLC38A9Q8NBW4 561 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 OR8D4Q8NGM9 314 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PATE1Q8WXA2 126 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 TSACCQ96A04 125 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CCDC3Q9BQI4 270 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 MID1IP1Q9NPA3 183 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 UFSP2Q9NUQ7 469 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 POT1Q9NUX5 634 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 POMT2Q9UKY4 750 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PCDHGB7Q9Y5F8 929 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PRAMEF4O60810 478 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CTSBP07858 339 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF7P17097 686 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CD82P27701 267 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 GRK5P34947 590 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CDKN2DP55273 166 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 STX4Q12846 297 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 FAM98BQ52LJ0 330 aaKnown RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PDZK1Q5T2W1 519 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 PRAMEF9Q5VWM5 478 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 KANK2Q63ZY3 851 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 SHISA5Q8N114 240 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CYP4Z2PQ8N1L4 340 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 FBXO39Q8N4B4 442 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CREB3L4Q8TEY5 395 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 TREX2Q9BQ50 279 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CD244Q9BZW8 370 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF436Q9C0F3 470 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-204ENST00000369530 MAGIXQ9H6Y5 334 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 IL1RL2Q9HB29 575 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 STARD5Q9NSY2 213 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 C14orf119Q9NWQ9 140 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CD84Q9UIB8 345 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CLEC4AQ9UMR7 237 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 EDARQ9UNE0 448 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 ING4Q9UNL4 249 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 AURKCQ9UQB9 309 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 CLCA2Q9UQC9 943 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
CSDE1-204ENST00000369530 SDK1Q7Z5N4 2213 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3DA0A087WVF3 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3IA0A087WXS9 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3EA0A087X179 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 TBC1D3KA0A087X1G2 549 aa6.4□□□□□ -1.39
CSDE1-204ENST00000369530 KIR2DS5A0A0G2JLQ3 304 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms