RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 TNFRSF12AQ9NP84 129 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 DLL4Q9NR61 685 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 NTMQ9P121 344 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
CTSD-202ENST00000367196 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
CTSD-202ENST00000367196 C7orf72A4D263 438 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 LSM1O15116 133 aaKnown RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 AKAP10O43572 662 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 NPHS1O60500 1241 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 SOX30O94993 753 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 OXSR1O95747 527 aaPredicted RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 ALOX5P09917 674 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 PPP3CBP16298 524 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 CD53P19397 219 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 FPR1P21462 350 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 TBXA2RP21731 343 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 CRYGSP22914 178 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 MAP3K8P41279 467 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 CTBP2P56545 445 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 MLC1Q15049 377 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 GALNTL6Q49A17 601 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 RFTN2Q52LD8 501 aaPredicted RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 MFSD12Q6NUT3 480 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 Q6ZSR9 355 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 BIVMQ86UB2 503 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 LRRC75A-AS1Q8N1F1 130 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 OR5M1Q8NGP8 315 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 OR6K3Q8NGY3 331 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 TWIST2Q8WVJ9 160 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 JADE3Q92613 823 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 POM121Q96HA1 1249 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 RTN4RQ9BZR6 473 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 ATAD3AQ9NVI7 634 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 KLHL28Q9NXS3 571 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 DNAJC15Q9Y5T4 150 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
CTSD-202ENST00000367196 MAP1AP78559 2803 aaPredicted RBP13.34□□□□□ -0.27
CTSD-202ENST00000367196 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 A0A1W2PQD3 144 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 H0YC42 278 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GMFGO60234 142 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 KCNK2O95069 426 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 SYNGR4O95473 234 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 IGKV1D-16P01601 117 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 FGF4P08620 206 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 KRT16P08779 473 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 LINC00032P0C843 101 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 HOXC12P31275 282 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 SERPINB5P36952 375 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 TPD52P55327 224 aaPredicted RBP13.33□□□□□ -0.28
CTSD-202ENST00000367196 ATP6AP1LQ52LC2 224 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 ZNF385BQ569K4 471 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 ZNF474Q6S9Z5 364 aaPredicted RBP13.33□□□□□ -0.28
CTSD-202ENST00000367196 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 ESPNLQ6ZVH7 1005 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GGNQ86UU5 652 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 STK32CQ86UX6 486 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 P3H2Q8IVL5 708 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 ZNF527Q8NB42 609 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 OR2T11Q8NH01 316 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GIMAP5Q96F15 307 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 CHMP6Q96FZ7 201 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 C18orf12Q96KH6 178 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 WFIKKN1Q96NZ8 548 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 STACQ99469 402 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GATA5Q9BWX5 397 aaPredicted RBP13.33□□□□□ -0.28
CTSD-202ENST00000367196 DUSP22Q9NRW4 184 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
CTSD-202ENST00000367196 C6orf203Q9P0P8 240 aaPredicted RBP13.33□□□□□ -0.28
CTSD-202ENST00000367196 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 FAM171A2A8MVW0 826 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 SMPD2O60906 423 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 LYPLA1O75608 230 aaPredicted RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 CGAP01215 116 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 PABPC4LP0CB38 370 aaKnown RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 ACP2P11117 423 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 ATP6V1C1P21283 382 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 EIF1P41567 113 aaKnown RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 RAC1P63000 192 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 POU6F2P78424 691 aaPredicted RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
CTSD-202ENST00000367196 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 DUSP5Q16690 384 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 FIGNL1Q6PIW4 674 aa13.32□□□□□ -0.28
CTSD-202ENST00000367196 APOOLQ6UXV4 268 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms