RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TPRG1Q6ZUI0 275 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 ZER1Q7Z7L7 766 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 OR10K1Q8NGX5 313 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 TREX2Q9BQ50 279 aaPredicted RBP11.91□□□□□ -0.5
VAMP1-201ENST00000361716 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
VAMP1-201ENST00000361716 RDH14Q9HBH5 336 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 NTMQ9P121 344 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 KIF25Q9UIL4 384 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 BTNL2Q9UIR0 455 aa11.91□□□□□ -0.5
VAMP1-201ENST00000361716 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 LRRN3E7EW58 273 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 PRODHO43272 600 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 HLA-DQB1P01920 261 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 TIA1P31483 386 aaKnown RBP eCLIP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 BTCP35070 178 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 GPR4P46093 362 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 STXBP1P61764 594 aaKnown RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 PAN3Q58A45 887 aaKnown RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SLC27A4Q6P1M0 643 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 TFAP2EQ6VUC0 442 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 HORMAD2Q8N7B1 307 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 BVESQ8NE79 360 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 TNFAIP8L1Q8WVP5 186 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 KLK6Q92876 244 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 RELTQ969Z4 430 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 OR2AG1Q9H205 316 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 LRRN3Q9H3W5 708 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 AP1M2Q9Y6Q5 423 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 CHD7Q9P2D1 2997 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 ZNF236Q9UL36 1845 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 C7orf66A4D0T2 115 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 GPR31O00270 319 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 FAAHO00519 579 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SOCS6O14544 535 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 PRMT3O60678 531 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 PEX14O75381 377 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 RLN2P04090 185 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 CBSLP0DN79 551 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 NPR2P20594 1047 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 CBSP35520 551 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 PPM1FP49593 454 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 BAMBIQ13145 260 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SFXN4Q6P4A7 337 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 MACC1Q6ZN28 852 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SLC38A5Q8WUX1 472 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 GPA33Q99795 319 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 REG4Q9BYZ8 158 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SEMA4CQ9C0C4 833 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 REEP4Q9H6H4 257 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 EXOSC1Q9Y3B2 195 aaKnown RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
VAMP1-201ENST00000361716 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.5
VAMP1-201ENST00000361716 DAPL1A0PJW8 107 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 FAM170BA6NMN3 283 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 MAGEB4O15481 346 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 CHST10O43529 356 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 FZD6O60353 706 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 APOC1P02654 83 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 GALTP07902 379 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 GNSP15586 552 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 GDNFP39905 211 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 CLDN12P56749 244 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 TAS2R41P59536 307 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 GK2Q14410 553 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ARSIQ5FYB1 569 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 FCRLBQ6BAA4 426 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 PYHIN1Q6K0P9 492 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 RGS7BPQ6MZT1 257 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 RNF180Q86T96 592 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 MNTQ99583 582 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 MED18Q9BUE0 208 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SLC6A20Q9NP91 592 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 C1GALT1Q9NS00 363 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 YIPF1Q9Y548 306 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 STON1Q9Y6Q2 735 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 D6RAR5 112 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 EFCAB14O75071 495 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SOX30O94993 753 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 S100A11P31949 105 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 TBPL1P62380 186 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 KRT33BQ14525 404 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 HLXQ14774 488 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SYPL1Q16563 259 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms