RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 PELOQ9BRX2 385 aaKnown RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 QRSL1Q9H0R6 528 aaKnown RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 DZANK1Q9NVP4 752 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 TAS2R8Q9NYW2 309 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 EEF1E1-BLOC1S5C9J1V9 151 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ARPC5O15511 151 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HSPA12AO43301 675 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 AQP9O43315 295 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HEXBP07686 556 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 GPX2P18283 190 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 CHRNEQ04844 493 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 MBTPS1Q14703 1052 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ADPRMQ3LIE5 342 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HAGHLQ6PII5 290 aaPredicted RBP12.91□□□□□ -0.34
VCP-201ENST00000358901 TMEM205Q6UW68 189 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ENTHD1Q8IYW4 607 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 SLC25A18Q9H1K4 315 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 ASB6Q9NWX5 421 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HS3ST2Q9Y278 367 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
VCP-201ENST00000358901 HMX3A6NHT5 357 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 KCNJ13O60928 360 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 PAHP00439 452 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 HERV-K104P61576 105 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 MGAT3Q09327 533 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 GPR19Q15760 415 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 SLC46A3Q7Z3Q1 461 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 AIFM2Q9BRQ8 373 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 CACNG2Q9Y698 323 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
VCP-201ENST00000358901 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
VCP-201ENST00000358901 PRSS3P35030 304 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 CLDN2P57739 230 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 CBFBQ13951 182 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 NSDHLQ15738 373 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 RAB11BQ15907 218 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 PGGHGQ32M88 737 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 COX20Q5RI15 118 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 TOR1AIP2Q8NFQ8 470 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
VCP-201ENST00000358901 URM1Q9BTM9 101 aaKnown RBP12.9□□□□□ -0.34
VCP-201ENST00000358901 OR51J1Q9H342 316 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 ASB4Q9Y574 426 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 KLK4Q9Y5K2 254 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 MMP2P08253 660 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 ACPPP15309 386 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 UQCRC1P31930 480 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 ENTPD8Q5MY95 495 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 LAX1Q8IWV1 398 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 PDZD9Q8IXQ8 264 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 SLCO4A1Q96BD0 722 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 C1QTNF2Q9BXJ5 285 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 MYEF2Q9P2K5 600 aaKnown RBP12.9□□□□□ -0.34
VCP-201ENST00000358901 KLHL21Q9UJP4 597 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 PLCH1Q4KWH8 1693 aa12.9□□□□□ -0.34
VCP-201ENST00000358901 RDH16O75452 317 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 PLATP00750 562 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 TFP02787 698 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 FUCA1P04066 466 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 LIPAP38571 399 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 CTBP2P56545 445 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 PCGF3Q3KNV8 242 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 DNAJC5GQ8N7S2 189 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 C4orf36Q96KX1 117 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 OR7D2Q96RA2 312 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 CWH43Q9H720 699 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 ACSS1Q9NUB1 689 aaPredicted RBP12.9□□□□□ -0.35
VCP-201ENST00000358901 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.35
VCP-201ENST00000358901 TRAV27A0A087WT01 109 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 GFRA2O00451 464 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ACP2P11117 423 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 CEBPBP17676 345 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 GIFP27352 417 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ACTBP60709 375 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ISL1P61371 349 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ACTG1P63261 375 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 CCSMST1Q4G0I0 132 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 SYT6Q5T7P8 510 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 IL20RBQ6UXL0 311 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 MAMDC2Q7Z304 686 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 ZNF619Q8N2I2 560 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 APOOQ9BUR5 198 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms