RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 OR4M1Q8NGD0 313 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 OR52L1Q8NGH7 329 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 C7orf50Q9BRJ6 194 aaKnown RBP16.52■□□□□ 0.23
RTN4-204ENST00000357732 ABCG5Q9H222 651 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 UBQLN3Q9H347 655 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 DPAGT1Q9H3H5 408 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 ENAMQ9NRM1 1142 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 ZNF780BQ9Y6R6 833 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 C12orf71A8MTZ7 269 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 TEAD1P28347 426 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 THBS2P35442 1172 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 GPR4P46093 362 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 AGFG1P52594 562 aaKnown RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 ERVK-21P61565 698 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 MADCAM1Q13477 382 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 FAM214AQ32MH5 1076 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 ABI3BPQ7Z7G0 1075 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 HMGN2P46Q86SG4 172 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 SAMD14Q8IZD0 417 aaPredicted RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 BBS1Q8NFJ9 593 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 OR5H6Q8NGV6 325 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 OR8K5Q8NH50 307 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 SUN5Q8TC36 379 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 ZNF681Q96N22 645 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 FCRL4Q96PJ5 515 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 OR2M2Q96R28 347 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 FERD3LQ96RJ6 166 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 RABL2AQ9UBK7 228 aaPredicted RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 RABL2BQ9UNT1 228 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 ZFR2Q9UPR6 939 aaKnown RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 ZNF443Q9Y2A4 671 aaPredicted RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 CSNK1G3Q9Y6M4 447 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 TBC1D3KA0A087X1G2 549 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 A0A0A6YYJ9 748 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 TBC1D3BA6NDS4 549 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 TBC1D3FA6NER0 549 aaPredicted RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 GLOD5A6NK44 160 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 SLC22A31A6NKX4 558 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 PPM1DO15297 605 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 MT-ND5P03915 603 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 THBS1P07996 1170 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 AP2S1P53680 142 aaPredicted RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 TBC1D3GQ6DHY5 549 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 SFXN4Q6P4A7 337 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 OR51G2Q8NGK0 314 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 ADAMTS15Q8TE58 950 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 GIMAP5Q96F15 307 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 GHITMQ9H3K2 345 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 KLHL31Q9H511 634 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 MRPS30Q9NP92 439 aaKnown RBP16.51■□□□□ 0.23
RTN4-204ENST00000357732 NPFFR2Q9Y5X5 522 aa16.51■□□□□ 0.23
RTN4-204ENST00000357732 PRRT4C9JH25 899 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 SOCS6O14544 535 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 AKR7A2O43488 359 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 FRS3O43559 492 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 PRKRAO75569 313 aaKnown RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 HNRNPA1P09651 372 aaKnown RBP eCLIP16.5■□□□□ 0.233e-6■□□□□ 10.5
RTN4-204ENST00000357732 MC3RP41968 323 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 CEP78Q5JTW2 689 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 BAIAP2L2Q6UXY1 529 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 GRASPQ7Z6J2 395 aaPredicted RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 NR2C2APQ86WQ0 139 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 ELMOD2Q8IZ81 293 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 OR5W2Q8NH69 310 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 SAMD8Q96LT4 415 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 MS4A4EQ96PG1 132 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 NDC1Q9BTX1 674 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 TEKT2Q9UIF3 430 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 HEATR5BQ9P2D3 2071 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 UNC119BA6NIH7 251 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 SHOXO15266 292 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 ANXA3P12429 323 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 CEBPBP17676 345 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 P2RY2P41231 377 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 STXBP1P61764 594 aaKnown RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 PITPNAQ00169 270 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 DUSP2Q05923 314 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 INSL4Q14641 139 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 AGERQ15109 404 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 PRPF38BQ5VTL8 546 aaKnown RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 RANBP3LQ86VV4 465 aaPredicted RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 NRROSQ86YC3 692 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 LNX2Q8N448 690 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 TMEM255BQ8WV15 326 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 KLK6Q92876 244 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 CITED4Q96RK1 184 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 TEX101Q9BY14 249 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 ISG20L2Q9H9L3 353 aaKnown RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 POLMQ9NP87 494 aaPredicted RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 ATP13A2Q9NQ11 1180 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 ELF5Q9UKW6 265 aaPredicted RBP16.5■□□□□ 0.23
RTN4-204ENST00000357732 SATB2Q9UPW6 733 aa16.5■□□□□ 0.23
RTN4-204ENST00000357732 DAPL1A0PJW8 107 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms