RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 A0A1W2PNR3 127 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 NUPL2O15504 423 aaKnown RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 B4GAT1O43505 415 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 NDUFV2P19404 249 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RPS27P42677 84 aaKnown RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ETV4P43268 484 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 COMMD6Q7Z4G1 85 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF695Q8IW36 515 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 WFDC5Q8TCV5 224 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 C16orf58Q96GQ5 468 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 C7orf26Q96N11 449 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 TUBA1CQ9BQE3 449 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RIMBP3CA6NJZ7 1639 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RIMBP3BA6NNM3 1639 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RIMBP3Q9UFD9 1639 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 TOX4O94842 621 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 DLSTP36957 453 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF81P51508 661 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 PSPHP78330 225 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ARHGAP19Q14CB8 494 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 STEAP3Q658P3 488 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF584Q8IVC4 421 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 MAFAQ8NHW3 353 aaPredicted RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 SLC2A12Q8TD20 617 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF689Q96CS4 500 aaPredicted RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 TMEM202A6NGA9 273 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 JRKO75564 520 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 STK17BO94768 372 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 HMGN2P05204 90 aaKnown RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ANKRD16Q6P6B7 361 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 NTAN1Q96AB6 310 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 IL26Q9NPH9 171 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 DECR2Q9NUI1 292 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 HSPB11Q9Y547 144 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ONECUT2O95948 504 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 CBSLP0DN79 551 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RPS3P23396 243 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 CBSP35520 551 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RAD52P43351 418 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 BIDP55957 195 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 TAS2R38P59533 333 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ANKRD54Q6NXT1 300 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 OR56B2PQ8NGI1 322 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 ULBP2Q9BZM5 246 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 RIMS3Q9UJD0 308 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 SHROOM2Q13796 1616 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 POM121BA6NF01 834 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 CDK3Q00526 305 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 HEPHL1Q6MZM0 1159 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 PDXPQ96GD0 296 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
VPS13A-202ENST00000357409 PARP12Q9H0J9 701 aaKnown RBP6.92□□□□□ -1.3
VPS13A-202ENST00000357409 UNC119BA6NIH7 251 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ANKRD30BLA7E2S9 258 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 MRPL33O75394 65 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FGF3P11487 239 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 GIPRP48546 466 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 AP3S2P59780 193 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ADPRMQ3LIE5 342 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 LIPJQ5W064 366 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ABHD12BQ7Z5M8 362 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 HORMAD2Q8N7B1 307 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 OR4K15Q8NH41 348 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF599Q96NL3 588 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FEVQ99581 238 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 BTNL10A8MVZ5 291 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CASC3O15234 703 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FESP07332 822 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 PPP5CP53041 499 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 RPS15AP62244 130 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 PLA2G7Q13093 441 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ILKQ13418 452 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 ADAM15Q13444 863 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 TBPL2Q6SJ96 375 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FBXL16Q8N461 479 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 OR2T33Q8NG76 320 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 MMP28Q9H239 520 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 C6orf106Q9H6K1 298 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 TRAPPC2LQ9UL33 140 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 COQ4Q9Y3A0 265 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FAM221AA4D161 298 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CYBAP13498 195 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CAV2P51636 162 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 RRNAD1Q96FB5 475 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 DDX31Q9H8H2 851 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 FAM90A27PA6NNH2 459 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 OMGP23515 440 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 RBMXP38159 391 aaKnown RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CNPY1Q3B7I2 92 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 GLT8D1Q68CQ7 371 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CORO6Q6QEF8 472 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 CXorf67Q86X51 503 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-202ENST00000357409 LILRB2Q8N423 598 aa6.91□□□□□ -1.3
VPS13A-202ENST00000357409 STT3BQ8TCJ2 826 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms