RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ENPP6Q6UWR7 440 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 TUBA1AQ71U36 451 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF687Q8N1G0 1237 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 CYB561A3Q8NBI2 242 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 OR2T4Q8NH00 348 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 SGK3Q96BR1 496 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 GPN2Q9H9Y4 310 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 POLHQ9Y253 713 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 SLC14A1Q13336 389 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 CNOT9Q92600 299 aaKnown RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 SERTM2A0A1B0GWG4 89 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 B4DXG7 233 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 CSNK1A1P48729 337 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 EFNA3P52797 238 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF92Q03936 586 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.32■□□□□ 0.2
COL27A1-201ENST00000356083 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 KLHDC8AQ8IYD2 350 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ASB9Q96DX5 294 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 DPH2Q9BQC3 489 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-201ENST00000356083 CALHM2Q9HA72 323 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ACTR3BQ9P1U1 418 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 C17orf113A0A1B0GUU1 675 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 A8MVM7 634 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 GAAP10253 952 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PTGER1P34995 402 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PPP5CP53041 499 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 UBE2G2P60604 165 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PLEKHS1Q5SXH7 462 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ARHGAP11AQ6P4F7 1023 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 KCNIP4Q6PIL6 250 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
COL27A1-201ENST00000356083 C1GALT1C1LP0DN25 315 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ETFAP13804 333 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 TGM4P49221 684 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 LYSMD4Q5XG99 296 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SKA3Q8IX90 412 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF461Q8TAF7 563 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 OR5P2Q8WZ92 322 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 TSPAN11A1L157 253 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 EDDM3BP56851 147 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 FAM122CQ6P4D5 195 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 RTP3Q9BQQ7 232 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 BOCQ9BWV1 1114 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 H3BSA7 217 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 HOXB5P09067 269 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 BPIP17213 487 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 MYBPHQ13203 477 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 RABEPKQ7Z6M1 372 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 HUS1BQ8NHY5 278 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SFXN5Q8TD22 340 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 FAM122AQ96E09 287 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SLC17A9Q9BYT1 436 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 C12orf49Q9H741 205 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 APOBEC3GQ9HC16 384 aaKnown RBP16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PRAMEF2O60811 474 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF728P0DKX0 622 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 EVI2BP34910 448 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 BRICD5Q6PL45 260 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SUMF2Q8NBJ7 301 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 RHBDF1Q96CC6 855 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 PTGDR2Q9Y5Y4 395 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 ATRXP46100 2492 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 EPHA5P54756 1037 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 BIDP55957 195 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 BEX5Q5H9J7 111 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 LIPIQ6XZB0 460 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 MYLIPQ8WY64 445 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SACM1LQ9NTJ5 587 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 MIA3Q5JRA6 1907 aa16.32■□□□□ 0.2
COL27A1-201ENST00000356083 SPTA1P02549 2419 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 LOC102725191A0A1B0GVB3 256 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ARPC5O15511 151 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 HIST2H3PS2Q5TEC6 136 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 FN3KRPQ9HA64 309 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ZNF217O75362 1048 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 CRYBA1P05813 215 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 PPIL3Q9H2H8 161 aaKnown RBP16.31■□□□□ 0.2
COL27A1-201ENST00000356083 MVB12BQ9H7P6 319 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 GABREP78334 506 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 F3P13726 295 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ACRV1P26436 265 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ERP29P30040 261 aaKnown RBP16.31■□□□□ 0.2
COL27A1-201ENST00000356083 CNTNAP3BQ96NU0 1288 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ADAMTS10Q9H324 1103 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 TRIP12Q14669 1992 aaPredicted RBP16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ANGPTL7O43827 346 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 CMTM2Q8TAZ6 248 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 ZMYND19Q96E35 227 aaPredicted RBP16.31■□□□□ 0.2
COL27A1-201ENST00000356083 CCDC32Q9BV29 185 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 PTTG2Q9NZH5 202 aa16.31■□□□□ 0.2
COL27A1-201ENST00000356083 EDN1P05305 212 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms