RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NGFRP08138 427 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 PMS2P3Q13401 168 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 IL11RAQ14626 422 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 OCLNQ16625 522 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 ITPAQ9BY32 194 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 ADNPQ9H2P0 1102 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 EXOSC3Q9NQT5 275 aaKnown RBP15.91■□□□□ 0.14
VPS13B-201ENST00000355155 PTTG2Q9NZH5 202 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 PI4KAP42356 2102 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 CPED1A4D0V7 1026 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 DYRK3O43781 588 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 IGF2P01344 180 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 RBM34P42696 430 aaKnown RBP15.91■□□□□ 0.14
VPS13B-201ENST00000355155 ACAA2P42765 397 aaKnown RBP15.91■□□□□ 0.14
VPS13B-201ENST00000355155 GPR143P51810 404 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 NUBP1P53384 320 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 SH3BGRP55822 239 aaPredicted RBP15.91■□□□□ 0.14
VPS13B-201ENST00000355155 CTBP2P56545 445 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 KLHL26Q53HC5 615 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 ARHGAP40Q5TG30 622 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 RNLSQ5VYX0 342 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 PLEKHM3Q6ZWE6 761 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 CCDC103Q8IW40 242 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF440Q8IYI8 595 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 SLC43A2Q8N370 569 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 METTL27Q8N6F8 245 aaPredicted RBP15.91■□□□□ 0.14
VPS13B-201ENST00000355155 BMPERQ8N8U9 685 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 LRFN5Q96NI6 719 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 BCL7BQ9BQE9 202 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 SEMA4CQ9C0C4 833 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 VN1R1Q9GZP7 353 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 SCN2AQ99250 2005 aa15.91■□□□□ 0.14
VPS13B-201ENST00000355155 PATE3B3GLJ2 98 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 POLR1CO15160 346 aaPredicted RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 CDC123O75794 336 aaPredicted RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 IL1RL1Q01638 556 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 RAB39AQ14964 217 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 SNAP47Q5SQN1 464 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 FIGNL1Q6PIW4 674 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF550Q7Z398 422 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 SLC2A12Q8TD20 617 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 DAZLQ92904 295 aaKnown RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 TMIGD2Q96BF3 282 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 GPA33Q99795 319 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 VCX3AQ9NNX9 186 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 RARRES3Q9UL19 164 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 EFCAB7A8K855 629 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 A8MU76 341 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 D6RAR5 112 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 PPM1FP49593 454 aaPredicted RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 TARDBPQ13148 414 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■■■■□ 20.7
VPS13B-201ENST00000355155 OR1Q1Q15612 314 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 PIGXQ8TBF5 258 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 FAM81AQ8TBF8 368 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 HS6ST2Q96MM7 605 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 POLDIP3Q9BY77 421 aaKnown RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 POLR1BQ9H9Y6 1135 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 SLC35A3Q9Y2D2 325 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 A0A0B4J2E0 115 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 A0A1B0GX12 115 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 HTR3EA5X5Y0 456 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 CPSF4LA6NMK7 179 aaKnown RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 ALAS2P22557 587 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 PRKCDQ05655 676 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 IRF3Q14653 427 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 Q6ZPB1 254 aaPredicted RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 PRICKLE2Q7Z3G6 844 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 SVOPQ8N4V2 548 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 OR1N1Q8NGS0 311 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 DOK4Q8TEW6 326 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 TSLPQ969D9 159 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 TRIM2Q9C040 744 aa15.9■□□□□ 0.14
VPS13B-201ENST00000355155 KRCC1Q9NPI7 259 aaPredicted RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 RSL24D1Q9UHA3 163 aaKnown RBP15.9■□□□□ 0.14
VPS13B-201ENST00000355155 CLDN24A6NM45 220 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 FMO3P31513 532 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 OVCH1Q7RTY7 1134 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 HMGN2P46Q86SG4 172 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 KIF18BQ86Y91 864 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 FAM26EQ8N5C1 309 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 BPIFB6Q8NFQ5 453 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 OR4N2Q8NGD1 307 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 LCORQ96JN0 433 aaPredicted RBP15.89■□□□□ 0.13
VPS13B-201ENST00000355155 CNPPD1Q9BV87 410 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 IL20Q9NYY1 176 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 CLCA1A8K7I4 914 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 FRS3O43559 492 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 IFNA16P05015 189 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 AVPR2P30518 371 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 SYT6Q5T7P8 510 aaPredicted RBP15.89■□□□□ 0.13
VPS13B-201ENST00000355155 PRAMEF17Q5VTA0 474 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 UBE2UQ5VVX9 321 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 NKAIN4Q8IVV8 208 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 FAR1Q8WVX9 515 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 MPP4Q96JB8 637 aa15.89■□□□□ 0.13
VPS13B-201ENST00000355155 GFM1Q96RP9 751 aaKnown RBP15.89■□□□□ 0.13
VPS13B-201ENST00000355155 A0A1W2PQD3 144 aa15.88■□□□□ 0.13
VPS13B-201ENST00000355155 H3BSA7 217 aa15.88■□□□□ 0.13
VPS13B-201ENST00000355155 CHP2O43745 196 aa15.88■□□□□ 0.13
VPS13B-201ENST00000355155 TMBIM6P55061 237 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms