RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 LRRC69Q6ZNQ3 347 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF548Q8NEK5 533 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ANKK1Q8NFD2 765 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ADAMTS16Q8TE57 1224 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SGCDQ92629 289 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SLC30A2Q9BRI3 323 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ANKRD12Q6UB98 2062 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 PLRG1O43660 514 aaKnown RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ATE1O95260 518 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 GLULP15104 373 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 CHRNEQ04844 493 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TUBA3EQ6PEY2 450 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 CBLL1Q75N03 491 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SYT14Q8NB59 555 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 RSC1A1Q92681 617 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TAMM41Q96BW9 452 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 NXPE2Q96DL1 559 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 WACQ9BTA9 647 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 VN1R3Q9BXE9 311 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TTYH1Q9H313 450 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 FARSAQ9Y285 508 aaKnown RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TAF1LQ8IZX4 1826 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 C5orf51A6NDU8 294 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF12P17014 697 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 HLCSP50747 726 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 DCAF7P61962 342 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 KCNJ10P78508 379 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 OCLNQ16625 522 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 OPN5Q6U736 354 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 RETREG3Q86VR2 466 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 BPIFA2Q96DR5 249 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 SLC29A1Q99808 456 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 MCM3APO60318 1980 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 HSPA12AO43301 675 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF182P17025 639 aaPredicted RBP13.96□□□□□ -0.17
COL17A1-201ENST00000353479 XKR5Q6UX68 686 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 CCL4L1Q8NHW4 92 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 TREX2Q9BQ50 279 aaPredicted RBP13.96□□□□□ -0.17
COL17A1-201ENST00000353479 SACM1LQ9NTJ5 587 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 TAS2R10Q9NYW0 307 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 A0A0X1KG70 313 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 OR2T1O43869 369 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 MYF6P23409 242 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 MALLQ13021 153 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 UGT8Q16880 541 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 Q6ZS52 159 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF554Q86TJ5 538 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 RADILQ96JH8 1075 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 CPPED1Q9BRF8 314 aaPredicted RBP13.96□□□□□ -0.17
COL17A1-201ENST00000353479 GPN2Q9H9Y4 310 aaPredicted RBP13.96□□□□□ -0.17
COL17A1-201ENST00000353479 ABCG2Q9UNQ0 655 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 USP22Q9UPT9 525 aa13.96□□□□□ -0.17
COL17A1-201ENST00000353479 DENRO43583 198 aaKnown RBP13.96□□□□□ -0.18
COL17A1-201ENST00000353479 POU3F2P20265 443 aaPredicted RBP13.96□□□□□ -0.18
COL17A1-201ENST00000353479 HOXC8P31273 242 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF750Q32MQ0 723 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 ABHD17CQ6PCB6 329 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 TSSK4Q6SA08 328 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 MAVSQ7Z434 540 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 SDR9C7Q8NEX9 313 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 CCDC74AQ96AQ1 378 aa13.96□□□□□ -0.18
COL17A1-201ENST00000353479 ZMYND19Q96E35 227 aaPredicted RBP13.96□□□□□ -0.18
COL17A1-201ENST00000353479 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.18
COL17A1-201ENST00000353479 SH3D21A4FU49 640 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 I6L893 689 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 M0R129 80 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 MAGEA12P43365 314 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 OR1Q1Q15612 314 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 HDHD5Q9BXW7 423 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 QRSL1Q9H0R6 528 aaKnown RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ANKRD28O15084 1053 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF749O43361 778 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ARAFP10398 606 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 CCR5P51681 352 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 GALNT6Q8NCL4 622 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 RCBTB1Q8NDN9 531 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ATG4BQ9Y4P1 393 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 J3KTA2 159 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 PHYHO14832 338 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ERVK-25P63136 954 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 MRPL2Q5T653 305 aaKnown RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 PODNL1Q6PEZ8 512 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 FAM83HQ6ZRV2 1179 aaPredicted RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 PAQR7Q86WK9 346 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ZNF611Q8N823 705 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 OR10A5Q9H207 317 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 ENAMQ9NRM1 1142 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 TRAV27A0A087WT01 109 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 PRKCDQ05655 676 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 AGBL4Q5VU57 503 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 KIAA1211LQ6NV74 962 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 TECPR1Q7Z6L1 1165 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 CCDC107Q8WV48 283 aa13.95□□□□□ -0.18
COL17A1-201ENST00000353479 LMF2Q9BU23 707 aaKnown RBP13.95□□□□□ -0.18
COL17A1-201ENST00000353479 RPP25Q9BUL9 199 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms