RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 DNAJC27Q9NZQ0 273 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TBC1D24Q9ULP9 559 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PLEKHM1Q9Y4G2 1056 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 MYO16Q9Y6X6 1858 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 NPIPB8E9PQR5 432 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TFAP2AP05549 437 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 ELK4P28324 431 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CDKN2CP42773 168 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 ACTA2P62736 377 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 ACTG2P63267 376 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 MLC1Q15049 377 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF675Q8TD23 568 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 MAFIPQ8WZ33 124 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 RSPRY1Q96DX4 576 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TCF7L1Q9HCS4 588 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 UBQLN4Q9NRR5 601 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TBX1O43435 398 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SCGNO76038 276 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PSKH1P11801 424 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 DRD3P35462 400 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CD97P48960 835 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 C21orf58P58505 322 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 XKRXQ6PP77 449 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CLIP4Q8N3C7 705 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SLC15A4Q8N697 577 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SLC46A1Q96NT5 459 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CCNL2Q96S94 520 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TREX2Q9BQ50 279 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PRAMEF33A0A0G2JMD5 474 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 GJE1A6NN92 205 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 CLCA1A8K7I4 914 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 A8MV72 311 aaPredicted RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PRAMEF10O60809 474 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 GPR3P46089 330 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 NUDT6P53370 316 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 PDE7AQ13946 482 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 RAB39AQ14964 217 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 TSTQ16762 297 aaKnown RBP11.39□□□□□ -0.59
SMAD9-201ENST00000350148 KIAA1211LQ6NV74 962 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 DEFB123Q8N688 67 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 MED11Q9P086 117 aa11.39□□□□□ -0.59
SMAD9-201ENST00000350148 RAB19A4D1S5 217 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 VSTM2BA6NLU5 285 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 GMFGO60234 142 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 NDUFB2O95178 105 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 APOC1P02654 83 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ATCAYQ86WG3 371 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 OR2A1Q8NGT9 310 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 RNF31Q96EP0 1072 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 TIGARQ9NQ88 270 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ASB6Q9NWX5 421 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ERVK-19Q9WJR5 959 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CDH10Q9Y6N8 788 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 H0YIG0 161 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 OR2T1O43869 369 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF432O94892 652 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
SMAD9-201ENST00000350148 BSGP35613 385 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 SPERTQ8NA61 448 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CREB3L4Q8TEY5 395 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 SLC38A5Q8WUX1 472 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 TMEM239Q8WW34 195 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 DDIT4LQ96D03 193 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 DIRAS2Q96HU8 199 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 TEX37Q96LM6 180 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 MED17Q9NVC6 651 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 MAU2Q9Y6X3 613 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 KCNE1BA0A087WTH5 132 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 SNX4O95219 450 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 LIM2P55344 173 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 PLGLB1Q02325 96 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CRYZQ08257 329 aaKnown RBP11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CBFBQ13951 182 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 OR4C15Q8NGM1 316 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CNIH3Q8TBE1 160 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ELP4Q96EB1 424 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF764Q96H86 408 aaPredicted RBP11.38□□□□□ -0.59
SMAD9-201ENST00000350148 DUSP22Q9NRW4 184 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 DAPP1Q9UN19 280 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 MTCH2Q9Y6C9 303 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 A6NL46 340 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 BLOC1S5-TXNDC5H3BN57 136 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 K7EQS6 105 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
SMAD9-201ENST00000350148 PLATP00750 562 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 ALPLP05186 524 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CNR2P34972 360 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CAPZBP47756 277 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 KCNJ5P48544 419 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 CD83Q01151 205 aa11.38□□□□□ -0.59
SMAD9-201ENST00000350148 RIPPLY1Q0D2K3 151 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms