RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 FGF18O76093 207 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 KLK1P06870 262 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 HOXB3P14651 431 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 NPPBP16860 134 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 RAB3AP20336 220 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 UQCRC2P22695 453 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 ATP6V1E1P36543 226 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 MTNR1BP49286 362 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 MLLT1Q03111 559 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 FAM198BQ6UWH4 519 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 Q6ZTK2 550 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 BTN2A1Q7KYR7 527 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 TRAM1L1Q8N609 369 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 TRMT10AQ8TBZ6 339 aaKnown RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 MAN2C1Q9NTJ4 1040 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 COPZ2Q9P299 210 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 LIPT1Q9Y234 373 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 SIRT4Q9Y6E7 314 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 A0A1W2PRQ8 180 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 RNF13O43567 381 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 RGS9O75916 674 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 UGT2B7P16662 529 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 FZD5Q13467 585 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 ZNF169Q14929 603 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 FAM71E1Q6IPT2 247 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 SFXN4Q6P4A7 337 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 OLIG3Q7RTU3 272 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 C2orf73Q8N5S3 287 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 POGLUT1Q8NBL1 392 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 TEX47Q8TBZ9 253 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 IRF7Q92985 503 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 NPAS1Q99742 590 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 USB1Q9BQ65 265 aaKnown RBP17.44■□□□□ 0.38
SCARF1-202ENST00000348987 SLC6A15Q9H2J7 730 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 DENND4CQ5VZ89 1909 aa17.44■□□□□ 0.38
SCARF1-202ENST00000348987 L7N2F9 121 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 PDCD5O14737 125 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 WDPCPO95876 746 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 TFP02787 698 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 WNT1P04628 370 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 IL3P08700 152 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 SLBPQ14493 270 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCARF1-202ENST00000348987 C1orf94Q6P1W5 598 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 MED27Q6P2C8 311 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 OR56B4Q8NH76 319 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 FERD3LQ96RJ6 166 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 PFDN2Q9UHV9 154 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 ZNF98A6NK75 572 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 HIDE1A8MVS5 230 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 KDM4EB2RXH2 506 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-202ENST00000348987 WASH3PC4AMC7 463 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 SLC28A2O43868 658 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 PRLHRP49683 370 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 SNTB2Q13425 540 aaKnown RBP17.43■□□□□ 0.38
SCARF1-202ENST00000348987 TEAD2Q15562 447 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 NDUFA9Q16795 377 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 SMARCD3Q6STE5 483 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 MORN4Q8NDC4 146 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 TRIM43Q96BQ3 446 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-202ENST00000348987 MRGPRX3Q96LB0 322 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 UQCC2Q9BRT2 126 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 MIEF1Q9NQG6 463 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 TAAR2Q9P1P5 351 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 WNT6Q9Y6F9 365 aa17.43■□□□□ 0.38
SCARF1-202ENST00000348987 SLC9B1P1A6NJY1 282 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 FAM170BA6NMN3 283 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SIGLEC5O15389 551 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 GATBO75879 557 aaKnown RBP17.42■□□□□ 0.38
SCARF1-202ENST00000348987 CXCL14O95715 111 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 APOC3P02656 99 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ACP5P13686 325 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ATP5A1P25705 553 aaKnown RBP17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SIGLEC14Q08ET2 396 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ENTPD8Q5MY95 495 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SFRP4Q6FHJ7 346 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-202ENST00000348987 LILRA6Q6PI73 481 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 RRM2BQ7LG56 351 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 DGLUCYQ7Z3D6 616 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 CFAP206Q8IYR0 622 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 BBS1Q8NFJ9 593 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 PIGKQ92643 395 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-202ENST00000348987 C20orf85Q9H1P6 137 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SLC6A17Q9H1V8 727 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 PRELID3BQ9Y3B1 194 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 C1orf105O95561 183 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 NFATC1O95644 943 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SYN1P17600 705 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ACSM1Q08AH1 577 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 SLC25A35Q3KQZ1 300 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ZNF322Q6U7Q0 402 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-202ENST00000348987 ESPNLQ6ZVH7 1005 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 KREMEN2Q8NCW0 462 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 DPH7Q9BTV6 452 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 BTBD1Q9H0C5 482 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 A4GALTQ9NPC4 353 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 HPF1Q9NWY4 346 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 CNIH4Q9P003 139 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 MRPL15Q9P015 296 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms