RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 UBE2UQ5VVX9 321 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CES4AQ5XG92 561 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 HBMQ6B0K9 141 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ARPC5LQ9BPX5 153 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 LCKP06239 509 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CSKP41240 450 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF74Q16587 644 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ZCCHC4Q9H5U6 513 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ENPP3O14638 875 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 FBXO48Q5FWF7 155 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 OR13C4Q8NGS5 318 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 MICU1Q9BPX6 476 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CEPT1Q9Y6K0 416 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 LRIT2A6NDA9 550 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 VNN1O95497 513 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 AQP2P41181 271 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 RPS21P63220 83 aaKnown RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CSNK2A1P68400 391 aaPredicted RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 RNF212Q495C1 297 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CPZQ66K79 652 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CSNK2A3Q8NEV1 391 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 DAZAP1Q96EP5 407 aaKnown RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ATAD5Q96QE3 1844 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 TSPAN6O43657 245 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 DIRAS1O95057 198 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CNR1P21554 472 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 PCDHGA7Q9Y5G6 932 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 K7EPK0 472 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 WNT7AO00755 349 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ANGPTL7O43827 346 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ADH5P11766 374 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 EFNA1P20827 205 aaPredicted RBP12.61□□□□□ -0.39
COL6A3-202ENST00000347401 OR1E2P47887 323 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 FAM71E2Q8N5Q1 922 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 TXLNGYQ9BZA5 131 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 Q9Y3F1 56 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 ASGR2P07307 311 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 PRKACGP22612 351 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 BTN1A1Q13410 526 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 RCBTB1Q8NDN9 531 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 PRRC1Q96M27 445 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 CD84Q9UIB8 345 aa12.61□□□□□ -0.39
COL6A3-202ENST00000347401 SERTAD2Q14140 314 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 C5orf46Q6UWT4 87 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 UMODL1-AS1Q8N2C9 162 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OR1S1Q8NH92 325 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OR1E3Q8WZA6 343 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CERS4Q9HA82 394 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CHRNA9Q9UGM1 479 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ARGFXA6NJG6 315 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 EEF1E1-BLOC1S5C9J1V9 151 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ARHGAP40Q5TG30 622 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 PXT1Q8NFP0 134 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 IL33O95760 270 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ALPIP09923 528 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ACVR1BP36896 505 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 UBE2KP61086 200 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 TMEM244Q5VVB8 128 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OR5D16Q8NGK9 328 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OPA3Q9H6K4 179 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CPNE7Q9UBL6 633 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 V9GY05 133 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 C2orf78A6NCI8 922 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 RGS11O94810 467 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 C6P13671 934 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 TAS2R38P59533 333 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 EEF1A1P5Q5VTE0 462 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 TANKQ92844 425 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 MRPL10Q7Z7H8 261 aaKnown RBP12.6□□□□□ -0.39
COL6A3-202ENST00000347401 GLB1L2Q8IW92 636 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 PITX2Q99697 317 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 LMF2Q9BU23 707 aaKnown RBP12.6□□□□□ -0.39
COL6A3-202ENST00000347401 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CD63P08962 238 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 TLE1Q04724 770 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 AMZ1Q400G9 498 aa12.6□□□□□ -0.39
COL6A3-202ENST00000347401 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms