RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GRNP28799 593 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 DGKQP52824 942 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 PPP2R2AP63151 447 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 BCL2A1Q16548 175 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 FLYWCH1Q4VC44 716 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 SPANXN4Q5MJ08 99 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 CCNJQ5T5M9 372 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 MTERF4Q7Z6M4 381 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 ANKRD46Q86W74 232 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 ZNF614Q8N883 585 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 OR4C3Q8NH37 302 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 C1GALT1C1Q96EU7 318 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 ZFP3Q96NJ6 502 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 OR7D2Q96RA2 312 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 OR52E6Q96RD3 313 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 PANX1Q96RD7 426 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 TM9SF2Q99805 663 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 GPATCH2Q9NW75 528 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 FLRT3Q9NZU0 649 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 BTNL2Q9UIR0 455 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 NCKAP5O14513 1909 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 A0A0G2JNJ9 132 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 TGDSO95455 350 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 NUDT14O95848 222 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 PGRP06401 933 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 SNRPB2P08579 225 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 H2AFXP16104 143 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 KHKP50053 298 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 GFRA1P56159 465 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 RPS3AP61247 264 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 UFM1P61960 85 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 EEF1A1P68104 462 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 TXNL4AP83876 142 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 HPCAP84074 193 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 PDCD4Q53EL6 469 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 TTMPQ5BVD1 217 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 EEF1A1P5Q5VTE0 462 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 P4HA3Q7Z4N8 544 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 GDF7Q7Z4P5 450 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 GATSQ8NAP1 163 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 PHOSPHO1Q8TCT1 267 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 NUDT8Q8WV74 236 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 MAELQ96JY0 434 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 SH3GL2Q99962 352 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 RMND5AQ9H871 391 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 Q9UFV3 132 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 USH1CQ9Y6N9 552 aa14.3□□□□□ -0.12
TSPAN4-201ENST00000346501 IGLV3-32A0A0A0MS00 114 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ANKRD28O15084 1053 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 HCRTR2O43614 444 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 GMFGO60234 142 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ZIC3O60481 467 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 STX11O75558 287 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ANP32DO95626 131 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ALDOCP09972 364 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ME2P23368 584 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 PEX19P40855 299 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 STARP49675 285 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ATP12AP54707 1039 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 WNT3P56703 355 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 EXOSC6Q5RKV6 272 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 MEX3BQ6ZN04 569 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 GRAMD2AQ8IUY3 354 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 UBQLNLQ8IYU4 475 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 MIER2Q8N344 545 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 B4GALNT2Q8NHY0 566 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 XAGE5Q8WWM1 108 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 CCDC115Q96NT0 180 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 SPOCK3Q9BQ16 436 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC35A5Q9BS91 424 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 UCK2Q9BZX2 261 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ZIM2Q9NZV7 527 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 ZNF629Q9UEG4 869 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 VDAC3Q9Y277 283 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 GPR45Q9Y5Y3 372 aa14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-201ENST00000346501 NKX2-6A6NCS4 301 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 H3BML4 177 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 RFXANKO14593 260 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 KRT75O95678 551 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 ZNF708P17019 499 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 BMP5P22003 454 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 OPRM1P35372 400 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 ADH7P40394 386 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 LHX2P50458 406 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 CACNA1CQ13936 2221 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 SGCBQ16585 318 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC9B1Q4ZJI4 515 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 DCST1Q5T197 706 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 ZNF621Q6ZSS3 439 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MCEMP1Q8IX19 187 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 OR5D16Q8NGK9 328 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 MIPOL1Q8TD10 442 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 WNT2BQ93097 391 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 ZBTB8AQ96BR9 441 aa14.28□□□□□ -0.12
TSPAN4-201ENST00000346501 SH3YL1Q96HL8 342 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms