RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KIF25Q9UIL4 384 aa13.91□□□□□ -0.18
CLCN1-201ENST00000343257 GMEB2Q9UKD1 530 aa13.91□□□□□ -0.18
CLCN1-201ENST00000343257 STON1Q9Y6Q2 735 aa13.91□□□□□ -0.18
CLCN1-201ENST00000343257 OR6C75A6NL08 312 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 SPDEFO95238 335 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 C1GALT1C1LP0DN25 315 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 LMAN2Q12907 356 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ZNF750Q32MQ0 723 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 CFAP206Q8IYR0 622 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 DCAF4L2Q8NA75 395 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 PTPN18Q99952 460 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ZNF649Q9BS31 505 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 A4GALTQ9NPC4 353 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ZCCHC3Q9NUD5 404 aaKnown RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 BABAM2Q9NXR7 383 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 PTTG3PQ9NZH4 202 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 NTMQ9P121 344 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ACSL5Q9ULC5 683 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 IRGMA1A4Y4 181 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 KDM4EB2RXH2 506 aaPredicted RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 SMAD9O15198 467 aaKnown RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 PPM1DO15297 605 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 NDUFA2O43678 99 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 NFYAP23511 347 aaPredicted RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 BAMBIQ13145 260 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 LASP1Q14847 261 aaKnown RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 C18orf63Q68DL7 685 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 TXNDC8Q6A555 127 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 POGLUT1Q8NBL1 392 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 RFKQ969G6 155 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 GINS4Q9BRT9 223 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 CCDC86Q9H6F5 360 aaKnown RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 ASB6Q9NWX5 421 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 NFKBIL1Q9UBC1 381 aaPredicted RBP13.9□□□□□ -0.18
CLCN1-201ENST00000343257 KCNE3Q9Y6H6 103 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 TRPM7Q96QT4 1865 aa13.9□□□□□ -0.18
CLCN1-201ENST00000343257 FEZF1A0PJY2 475 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 LRRN3E7EW58 273 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 PEX14O75381 377 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ATF1P18846 271 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 HCCSP53701 268 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 AADACL4Q5VUY2 407 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CDC73Q6P1J9 531 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 NRMQ8IXM6 262 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 AMER3Q8N944 861 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 RASGEF1AQ8N9B8 481 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 OR56A3Q8NH54 315 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 OR56B4Q8NH76 319 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 OR1F2PQ96R84 312 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 UBL7Q96S82 380 aaPredicted RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 HCAR1Q9BXC0 346 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 LRRN3Q9H3W5 708 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 WSB2Q9NYS7 404 aaPredicted RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CBLCQ9ULV8 474 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ERAL1O75616 437 aaKnown RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 C8orf89P0DMQ9 161 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CCR8P51685 355 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ZNF169Q14929 603 aaPredicted RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CPXM2Q8N436 756 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ABHD4Q8TB40 342 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 SLC35G5Q96KT7 338 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ZCCHC4Q9H5U6 513 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CWH43Q9H720 699 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 XIRP2A4UGR9 3374 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 IGLV3-16A0A075B6K0 115 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 NPC1O15118 1278 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 SURF4O15260 269 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 IGF2P01344 180 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CHRM4P08173 479 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CLDN12P56749 244 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 ERVK-25P63136 954 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 HLXQ14774 488 aaPredicted RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 FAM74A1Q5RGS3 127 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 SLC25A30Q5SVS4 291 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 Q6ZVU0 165 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 CXXC5Q7LFL8 322 aaKnown RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 FGD2Q7Z6J4 655 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 PAQR7Q86WK9 346 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 OR11G2Q8NGC1 345 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 AUTS2Q8WXX7 1259 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 C16orf58Q96GQ5 468 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 KLF16Q9BXK1 252 aaPredicted RBP13.89□□□□□ -0.19
CLCN1-201ENST00000343257 MTG2Q9H4K7 406 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 LDAHQ9H6V9 325 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 COPZ2Q9P299 210 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 P2RX2Q9UBL9 471 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 KLK11Q9UBX7 282 aa13.89□□□□□ -0.19
CLCN1-201ENST00000343257 SLC13A4Q9UKG4 626 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms