RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 UPK3BL1B0FP48 263 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 UPK3BL2E5RIL1 263 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 EPHX1P07099 455 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 LAG3P18627 525 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 CCR8P51685 355 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ECH1Q13011 328 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 MPPED2Q15777 294 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 MAPK14Q16539 360 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 TMEM88Q6PEY1 159 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 RAD51AP1Q96B01 352 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 PHYHIPLQ96FC7 376 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 CPEB1Q9BZB8 566 aaKnown RBP17.36■□□□□ 0.37
SMPD1-201ENST00000342245 FXYD6Q9H0Q3 95 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 RBPJLQ9UBG7 517 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ST3GAL5Q9UNP4 418 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 SIGLEC5O15389 551 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 C6orf47O95873 294 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 CRYBA1P05813 215 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 GP1BAP07359 652 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 SHC1P29353 583 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 RAD52P43351 418 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 CASP9P55211 416 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 RAE1P78406 368 aaKnown RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 SIGLEC14Q08ET2 396 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 KCNA10Q16322 511 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 TEX30Q5JUR7 227 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 SFRP4Q6FHJ7 346 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF783Q6ZMS7 281 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 FAM122BQ7Z309 247 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 SERPINA12Q8IW75 414 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 TEX19Q8NA77 164 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 THEM6Q8WUY1 208 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 TRMT2BQ96GJ1 504 aaKnown RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF649Q9BS31 505 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 TINF2Q9BSI4 451 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 ENTPD4Q9Y227 616 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 A0A0G2JK05 382 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 UBE2CO00762 179 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 KHDRBS3O75525 346 aaKnown RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 MMP11P24347 488 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 PTGFRP43088 359 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 SLC6A11P48066 632 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 GPR15P49685 360 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 IRF8Q02556 426 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 RNASE12Q5GAN4 147 aaKnown RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 FAM74A1Q5RGS3 127 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 LIN54Q6MZP7 749 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 PODNL1Q6PEZ8 512 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 UBE2R2Q712K3 238 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 THAP6Q8TBB0 222 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 ELAC1Q9H777 363 aaKnown RBP17.35■□□□□ 0.37
SMPD1-201ENST00000342245 CTPS2Q9NRF8 586 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 MED17Q9NVC6 651 aa17.35■□□□□ 0.37
SMPD1-201ENST00000342245 PAPPA2Q9BXP8 1791 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 A0A0D9SG52 128 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 A0A0G2JLL6 359 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 ANKRD61A6NGH8 418 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF729A6NN14 1252 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 SPDEFO95238 335 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 PAICSP22234 425 aaKnown RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 TIA1P31483 386 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 PGFP49763 221 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 TRAM2Q15035 370 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 SLC5A12Q1EHB4 618 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF791Q3KP31 576 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 OLFML2AQ68BL7 652 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF425Q6IV72 752 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 TAPT1Q6NXT6 567 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 PRRT2Q7Z6L0 340 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 RNF113BQ8IZP6 322 aaKnown RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 EDARADDQ8WWZ3 215 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 GAL3ST1Q99999 423 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 MFFQ9GZY8 342 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 C8orf33Q9H7E9 229 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 A4GALTQ9NPC4 353 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 CARHSP1Q9Y2V2 147 aaKnown RBP17.34■□□□□ 0.37
SMPD1-201ENST00000342245 PLEKHM1Q9Y4G2 1056 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 KIAA1671Q9BY89 1806 aa17.34■□□□□ 0.37
SMPD1-201ENST00000342245 C2orf74A8MZ97 194 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 F5H5P2 479 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 GPR31O00270 319 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 GATBO75879 557 aaKnown RBP17.33■□□□□ 0.37
SMPD1-201ENST00000342245 UBXN7O94888 489 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 HOXD9P28356 352 aaPredicted RBP17.33■□□□□ 0.37
SMPD1-201ENST00000342245 IFNGR2P38484 337 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 RGRP47804 291 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 C10orf91Q5T1B1 145 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 FUT10Q6P4F1 479 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 TMEM185AQ8NFB2 350 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 THAP4Q8WY91 577 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 ZDHHC12Q96GR4 267 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 TMEM41AQ96HV5 264 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 BOCQ9BWV1 1114 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 TRIM36Q9NQ86 728 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.37
SMPD1-201ENST00000342245 PRSS21Q9Y6M0 314 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.37
SMPD1-201ENST00000342245 GNG14A0A1W2PPG7 69 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms