RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RPL22P35268 128 aaKnown RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 MVKQ03426 396 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 DUSP2Q05923 314 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 NAE1Q13564 534 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ADIPOQQ15848 244 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ELFN2Q5R3F8 820 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 TUSC5Q8IXB3 177 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 KLHDC8AQ8IYD2 350 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ABHD3Q8WU67 409 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 POP5Q969H6 163 aaKnown RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 RBM18Q96H35 190 aaKnown RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ADGRG7Q96K78 797 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 MAK16Q9BXY0 300 aaKnown RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 CHIAQ9BZP6 476 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 SLC6A13Q9NSD5 602 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 EHD3Q9NZN3 535 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 KLHL42Q9P2K6 505 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 MYO6Q9UM54 1294 aa9.52□□□□□ -0.89
ATXN3-201ENST00000340660 HEATR1Q9H583 2144 aaKnown RBP9.52□□□□□ -0.89
ATXN3-201ENST00000340660 ARHGAP32A7KAX9 2087 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 RGS14O43566 566 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 CXCL13O43927 109 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 OR4A8P0C604 315 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 COL8A2P25067 703 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 REEP5Q00765 189 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 PLIN5Q00G26 463 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 CTBP1Q13363 440 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 NNATQ16517 81 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 PPP1R3AQ16821 1122 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF311Q5JNZ3 666 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 SH2D4BQ5SQS7 431 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 ANKRD22Q5VYY1 191 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 LUZP1Q86V48 1076 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 TBC1D19Q8N5T2 526 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 DEFB108BQ8NET1 73 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 BIRC8Q96P09 236 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 QKIQ96PU8 341 aaKnown RBP eCLIP9.51□□□□□ -0.89
ATXN3-201ENST00000340660 OR4K3Q96R72 315 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 MAPKAP1Q9BPZ7 522 aa9.51□□□□□ -0.89
ATXN3-201ENST00000340660 NXF5Q9H1B4 397 aaKnown RBP9.51□□□□□ -0.89
ATXN3-201ENST00000340660 FAM120CQ9NX05 1096 aaKnown RBP9.51□□□□□ -0.89
ATXN3-201ENST00000340660 LIMA1Q9UHB6 759 aaKnown RBP9.51□□□□□ -0.89
ATXN3-201ENST00000340660 DNAH10Q8IVF4 4471 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 CCDC151A5D8V7 595 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 SRRM5B3KS81 715 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 RAD51DO75771 328 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 ERCC1P07992 297 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 NAGAP17050 411 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 GRK2P25098 689 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 PPARGP37231 505 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 MTNR1AP48039 350 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 RFX3P48380 749 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 NR2C2P49116 596 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 PLA2G16P53816 162 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 STXBP1P61764 594 aaKnown RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 RCN2Q14257 317 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 ADRM1Q16186 407 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 HLA-DQA1Q5Y7H0 255 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 AGTRAPQ6RW13 159 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 RIBC1Q8N443 379 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF433Q8N7K0 673 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 OMA1Q96E52 524 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF778Q96MU6 729 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-201ENST00000340660 TOR3AQ9H497 397 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 ZBTB26Q9HCK0 441 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 CA10Q9NS85 328 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 KLHL13Q9P2N7 655 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 AP4B1Q9Y6B7 739 aa9.5□□□□□ -0.89
ATXN3-201ENST00000340660 LRIT2A6NDA9 550 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 EEDO75530 441 aaKnown RBP9.49□□□□□ -0.89
ATXN3-201ENST00000340660 SYNGR4O95473 234 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 TBX6O95947 436 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-201ENST00000340660 CD247P20963 164 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 GAS1P54826 345 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 CDH17Q12864 832 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 VMACQ2NL98 169 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 ITPRIPL1Q6GPH6 555 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 CASC4Q6P4E1 433 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 VSIG1Q86XK7 387 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 FADS6Q8N9I5 356 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 SLC16A11Q8NCK7 471 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 BBOF1Q8ND07 529 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 TRIM58Q8NG06 486 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 OR4K17Q8NGC6 315 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 SNF8Q96H20 258 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 DOK1Q99704 481 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 HAUS8Q9BT25 410 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 ISCUQ9H1K1 167 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 TPK1Q9H3S4 243 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 MARCH7Q9H992 704 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 TAB2Q9NYJ8 693 aa9.49□□□□□ -0.89
ATXN3-201ENST00000340660 ZBTB14O43829 449 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 SFTPBP07988 381 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 IGLL1P15814 213 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 ALOX15P16050 662 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 RBL1P28749 1068 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 TTPAP49638 278 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms